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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 2647.9
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 4627.2
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 5579.2
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 2969.3
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 2746.1
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 2878.7
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 5283.4
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 1891.1
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 11739.0
Min RPKM: 539.1
Std RPKM: 1928.0
Median RPKM: 3210.2
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
11739.0
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
10488.6
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
7481.5
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
7436.8
GTEX-11ZUS-2526-SM-59872
30-39 years, male
7025.5
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
6796.6
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
6790.3
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
6781.7
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
6406.6
GTEX-13113-1326-SM-5GCOI
60-69 years, female
6332.9
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
6325.0
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
6184.2
GTEX-13112-1426-SM-5EGH8
50-59 years, male
6178.4
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
5956.6
GTEX-YECK-1926-SM-4W21H
60-69 years, male
5950.0
GTEX-11GSP-0626-SM-5986T
60-69 years, female
5907.1
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
5894.3
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
5865.6
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
5723.1
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
5538.9
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
5491.3
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
5480.6
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
5462.4
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
5325.7
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
5295.0
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
5255.2
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
5223.9
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
4975.7
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
4880.1
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
4806.2
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
4688.9
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
4669.1
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
4597.0
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
4576.8
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
4547.6
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
4512.2
GTEX-X261-1726-SM-4PQYT
50-59 years, male
4503.5
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
4404.9
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
4221.8
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
4209.1
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
4179.7
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
4098.6
GTEX-REY6-1226-SM-48FDR
60-69 years, male
4072.9
GTEX-RN64-1826-SM-48FDV
50-59 years, male
4035.9
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
3931.6
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
3906.2
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
3865.7
GTEX-S33H-1626-SM-4AD68
30-39 years, male
3798.3
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
3793.2
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
3647.7
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
3588.4
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
3563.6
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
3500.6
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
3386.2
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
3339.4
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
3324.9
GTEX-RU72-1426-SM-46MUF
50-59 years, female
3306.4
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
3246.7
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
3224.5
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
3210.2
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
3144.8
GTEX-QESD-2026-SM-447BI
20-29 years, male
3101.4
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
3063.4
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
3030.2
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
3021.5
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
2925.1
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
2917.8
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
2855.8
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
2854.7
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
2846.8
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
2753.1
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
2731.8
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
2711.4
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
2672.7
GTEX-Q734-0326-SM-48U15
40-49 years, female
2659.1
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
2647.8
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
2545.0
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
2502.9
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
2471.4
GTEX-1399T-0826-SM-5IFES
60-69 years, male
2456.4
GTEX-12696-0826-SM-5EGGE
60-69 years, male
2430.8
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
2404.1
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
2373.5
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
2355.8
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
2349.1
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
2334.9
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
2246.9
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
2243.0
GTEX-P78B-1326-SM-3P611
40-49 years, female
2175.1
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
2116.4
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
2110.0
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
2076.8
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
2069.5
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
2037.5
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
1992.1
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
1966.9
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
1951.4
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
1924.4
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
1893.9
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
1807.6
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
1782.3
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
1740.3
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
1702.6
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
1696.9
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
1685.3
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
1650.7
GTEX-QEL4-1226-SM-447A4
50-59 years, male
1584.3
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
1576.7
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
1545.7
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
1454.3
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
1404.8
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
1397.2
GTEX-S32W-1926-SM-4AD63
50-59 years, female
1355.5
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
1261.5
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
1244.6
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
1214.4
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
1156.4
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
1071.5
GTEX-R53T-0326-SM-48FEC
50-59 years, female
539.1
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.