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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 5966.1
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 10174.5
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 17877.5
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 7130.8
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 7844.7
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 12176.9
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 12621.4
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 3576.6
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 40031.3
Min RPKM: 810.2
Std RPKM: 7250.4
Median RPKM: 12397.9
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
40031.3
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
39011.3
GTEX-YECK-1926-SM-4W21H
60-69 years, male
34992.7
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
29705.0
GTEX-11ZUS-2526-SM-59872
30-39 years, male
27492.8
GTEX-11GSP-0626-SM-5986T
60-69 years, female
25889.5
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
25701.9
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
25679.8
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
25377.6
GTEX-13112-1426-SM-5EGH8
50-59 years, male
24887.0
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
24498.0
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
23081.7
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
23056.7
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
22612.7
GTEX-RU72-1426-SM-46MUF
50-59 years, female
21956.3
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
21934.4
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
21901.4
GTEX-RN64-1826-SM-48FDV
50-59 years, male
20975.3
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
20908.0
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
20785.6
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
20741.2
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
20444.7
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
19935.8
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
19917.8
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
19572.6
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
18848.0
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
18679.6
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
18294.5
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
18080.9
GTEX-X261-1726-SM-4PQYT
50-59 years, male
17477.2
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
17379.1
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
17331.1
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
17183.3
GTEX-12696-0826-SM-5EGGE
60-69 years, male
16844.7
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
16325.9
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
16150.4
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
16149.0
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
16032.4
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
15489.4
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
15186.7
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
14936.0
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
14813.4
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
14681.3
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
14625.7
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
14617.8
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
14381.5
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
14192.4
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
14108.7
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
13863.2
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
13668.9
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
13633.2
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
13483.1
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
13469.3
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
13363.5
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
13333.9
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
13239.2
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
13004.6
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
12826.2
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
12545.1
GTEX-S33H-1626-SM-4AD68
30-39 years, male
12397.9
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
12181.4
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
11788.9
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
11529.6
GTEX-P78B-1326-SM-3P611
40-49 years, female
11440.5
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
11281.0
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
11278.8
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
11253.9
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
11222.5
GTEX-13113-1326-SM-5GCOI
60-69 years, female
11190.1
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
11147.7
GTEX-1399T-0826-SM-5IFES
60-69 years, male
10860.5
GTEX-REY6-1226-SM-48FDR
60-69 years, male
10838.7
GTEX-QESD-2026-SM-447BI
20-29 years, male
10528.2
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
10266.7
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
10169.9
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
10012.4
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
9798.7
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
9745.6
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
9716.9
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
9657.8
GTEX-S32W-1926-SM-4AD63
50-59 years, female
9639.4
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
9440.3
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
9365.4
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
9291.5
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
9245.7
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
8864.8
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
8669.4
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
8630.4
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
8579.5
GTEX-QEL4-1226-SM-447A4
50-59 years, male
8384.2
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
8267.9
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
8102.9
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
8044.2
GTEX-Q734-0326-SM-48U15
40-49 years, female
8039.3
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
8020.5
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
7971.1
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
7066.9
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
6971.3
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
6958.2
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
6722.5
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
6276.3
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
6236.1
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
6059.8
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
5984.2
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
5915.5
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
5780.9
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
5739.9
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
5703.5
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
5686.1
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
5656.2
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
5589.0
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
5463.2
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
5191.9
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
4932.5
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
4527.8
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
4420.8
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
4259.0
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
3672.4
GTEX-R53T-0326-SM-48FEC
50-59 years, female
810.2
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.