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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 582.4
Min RPKM: 213.7
Std RPKM: 71.7
Median RPKM: 371.8
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
582.4
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
578.9
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
560.2
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
539.8
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
500.1
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
486.8
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
480.5
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
477.1
GTEX-QV31-0126-SM-447BP
30-39 years, male
476.9
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
472.0
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
464.8
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
464.7
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
458.3
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
456.3
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
456.1
GTEX-QCQG-0226-SM-48U28
50-59 years, female
456.1
GTEX-R55G-0226-SM-48FEI
40-49 years, female
455.6
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
455.5
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
451.2
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
450.0
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
445.1
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
445.1
GTEX-QLQW-0126-SM-447BK
30-39 years, male
444.5
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
439.1
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
438.8
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
435.7
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
432.3
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
431.4
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
431.3
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
427.7
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
427.3
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
413.7
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
413.0
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
412.3
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
411.4
GTEX-144GN-2126-SM-5O99D
50-59 years, male
398.5
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
396.0
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
394.7
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
394.2
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
390.9
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
387.8
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
384.0
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
383.6
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
382.5
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
381.4
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
379.8
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
378.9
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
378.9
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
378.5
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
378.5
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
374.5
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
371.9
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
371.6
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
369.8
GTEX-X585-1826-SM-4QAS3
50-59 years, male
368.0
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
363.8
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
361.9
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
359.0
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
356.7
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
356.4
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
356.3
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
352.5
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
351.9
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
350.0
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
345.6
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
344.0
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
342.7
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
337.0
GTEX-PX3G-0926-SM-48U12
20-29 years, female
335.0
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
333.7
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
332.7
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
329.5
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
329.4
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
329.1
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
329.1
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
326.5
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
324.9
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
324.5
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
323.2
GTEX-13111-0126-SM-5EGHO
50-59 years, male
320.0
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
320.0
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
319.1
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
319.1
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
319.0
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
318.9
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
318.3
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
318.0
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
317.9
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
317.8
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
315.4
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
313.6
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
309.5
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
306.1
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
304.7
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
301.9
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
300.0
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
296.2
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
293.8
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
282.0
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
270.5
GTEX-Q734-0226-SM-48U1A
40-49 years, female
257.8
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
241.3
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
233.8
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
213.7
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.