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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1699.3
Min RPKM: 563.4
Std RPKM: 228.9
Median RPKM: 935.3
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
1699.3
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
1603.9
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
1531.9
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
1493.8
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
1418.0
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
1411.5
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
1349.6
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
1348.2
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
1340.1
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
1329.5
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
1321.3
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
1303.2
GTEX-RU72-2226-SM-46MUE
50-59 years, female
1282.6
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
1244.4
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
1236.7
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
1224.2
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
1184.6
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
1176.8
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
1118.9
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
1098.2
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
1085.0
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
1072.9
GTEX-S32W-1226-SM-4AD67
50-59 years, female
1071.8
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
1070.5
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
1055.5
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
1054.5
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
1043.0
GTEX-P78B-1926-SM-3P616
40-49 years, female
1037.6
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
1036.8
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
1031.5
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
1017.7
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
1007.3
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
1001.6
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
999.7
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
995.9
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
995.3
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
994.6
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
991.9
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
984.8
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
978.0
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
975.8
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
969.1
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
965.2
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
962.7
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
956.8
GTEX-S341-0726-SM-4AD5R
40-49 years, female
949.2
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
947.1
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
940.8
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
935.3
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
929.9
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
928.7
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
917.9
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
917.3
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
914.6
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
891.7
GTEX-11I78-1926-SM-59878
50-59 years, female
891.0
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
890.2
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
884.9
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
883.7
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
872.9
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
866.2
GTEX-Q734-0726-SM-48TZP
40-49 years, female
862.3
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
861.8
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
859.5
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
858.9
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
856.8
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
845.5
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
839.2
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
837.7
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
831.0
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
829.1
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
828.5
GTEX-QCQG-1426-SM-48U22
50-59 years, female
827.1
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
818.8
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
817.1
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
806.0
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
799.4
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
783.9
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
773.4
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
769.7
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
766.4
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
766.1
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
749.1
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
733.0
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
724.2
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
714.8
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
713.4
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
706.1
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
705.9
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
695.7
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
683.8
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
675.7
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
673.5
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
661.8
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
609.8
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
597.1
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
563.4
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.