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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 1706.2
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 2259.5
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 2925.6
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1519.1
Min RPKM: 223.4
Std RPKM: 177.7
Median RPKM: 465.4
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
1519.1
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
1180.8
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
1102.5
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
1037.8
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
1027.8
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
908.8
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
814.0
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
803.9
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
801.4
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
790.3
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
777.1
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
767.7
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
765.1
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
761.7
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
760.7
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
741.6
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
737.1
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
722.5
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
715.6
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
711.4
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
709.9
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
701.9
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
687.0
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
679.0
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
663.8
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
660.5
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
657.3
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
655.6
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
646.9
GTEX-QEL4-2126-SM-447AE
50-59 years, male
642.4
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
641.7
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
641.1
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
627.7
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
626.4
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
617.1
GTEX-RU72-0626-SM-46MUI
50-59 years, female
616.6
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
615.2
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
607.0
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
600.9
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
593.1
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
590.3
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
588.4
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
587.7
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
584.1
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
584.0
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
582.8
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
582.1
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
580.5
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
578.4
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
577.6
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
569.1
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
565.6
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
565.2
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
562.7
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
559.2
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
558.3
GTEX-13113-1726-SM-5GCOO
60-69 years, female
556.6
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
556.1
GTEX-S341-1526-SM-4AD6K
40-49 years, female
556.0
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
547.8
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
546.0
GTEX-1192X-2326-SM-5987X
50-59 years, male
544.4
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
540.4
GTEX-11P81-1926-SM-5BC53
30-39 years, female
539.8
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
536.7
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
534.9
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
533.4
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
530.5
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
529.9
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
527.1
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
526.7
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
526.7
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
525.9
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
525.1
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
524.0
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
523.8
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
519.9
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
519.0
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
517.3
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
516.2
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
510.4
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
504.9
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
502.1
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
500.9
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
499.3
GTEX-XBED-1626-SM-47JYN
60-69 years, male
497.1
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
496.4
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
496.4
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
496.3
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
496.2
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
495.6
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
495.5
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
495.0
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
492.7
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
488.3
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
483.4
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
483.1
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
482.6
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
481.5
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
479.9
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
479.7
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
476.5
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
470.9
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
468.2
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
467.7
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
467.3
GTEX-X261-0626-SM-3NMD9
50-59 years, male
465.6
GTEX-111YS-1926-SM-5GICC
60-69 years, male
465.3
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
464.0
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
461.8
GTEX-TML8-1226-SM-32QON
40-49 years, female
460.6
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
460.1
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
459.9
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
450.0
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
449.7
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
448.7
GTEX-1122O-1226-SM-5H113
60-69 years, female
446.7
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
443.5
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
440.3
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
439.8
GTEX-14753-2426-SM-5LU8U
60-69 years, male
438.7
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
437.6
GTEX-11EI6-0626-SM-5985T
60-69 years, male
429.0
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
426.5
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
426.1
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
424.7
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
423.5
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
420.8
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
420.7
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
418.4
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
416.2
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
415.3
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
410.7
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
407.8
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
407.7
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
407.4
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
406.0
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
402.7
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
402.5
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
402.3
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
402.1
GTEX-11OF3-1926-SM-59889
60-69 years, male
400.2
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
399.2
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
395.9
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
390.1
GTEX-117YX-1426-SM-5H12H
50-59 years, male
388.9
GTEX-QVJO-1826-SM-447C9
60-69 years, female
384.8
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
384.3
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
380.5
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
377.9
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
376.7
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
375.6
GTEX-11P82-1326-SM-5HL62
20-29 years, male
375.2
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
372.7
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
371.5
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
370.8
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
364.5
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
361.6
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
360.6
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
359.2
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
358.5
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
357.8
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
355.4
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
354.2
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
353.1
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
347.8
GTEX-REY6-2426-SM-48FF5
60-69 years, male
347.5
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
344.4
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
341.6
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
341.6
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
340.8
GTEX-WFON-1826-SM-3GILG
40-49 years, male
339.7
GTEX-T6MN-0726-SM-32PML
50-59 years, male
339.1
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
337.7
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
337.6
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
335.6
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
334.9
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
333.6
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
321.7
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
319.3
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
316.9
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
316.0
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
315.8
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
312.6
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
311.6
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
309.2
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
306.7
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
304.7
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
303.2
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
302.8
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
302.1
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
300.0
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
293.9
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
290.1
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
289.2
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
285.5
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
285.5
GTEX-R53T-1526-SM-48FEK
50-59 years, female
278.0
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
277.9
GTEX-144GM-0926-SM-5O994
20-29 years, male
274.1
GTEX-R55D-0826-SM-48FEA
50-59 years, male
273.3
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
268.1
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
268.1
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
261.8
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
260.7
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
259.4
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
253.5
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
240.9
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
240.2
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
238.6
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
236.6
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
227.0
GTEX-117XS-1926-SM-5GICO
60-69 years, male
226.6
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
223.4
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.