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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 6546.6
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 6313.9
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 5408.5
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 6360.8
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 6147.6
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 7034.8
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 7273.4
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 6540.4
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 7432.8
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 12913.4
Min RPKM: 2289.0
Std RPKM: 2012.1
Median RPKM: 6597.2
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
12913.4
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
11898.7
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
11814.2
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
11694.9
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
11611.1
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
11195.9
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
11159.6
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
11007.8
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
10784.8
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
10753.6
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
10728.7
GTEX-RN64-2326-SM-48FDW
50-59 years, male
10412.6
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
10327.5
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
9984.8
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
9746.3
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
9584.0
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
9495.4
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
9353.4
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
9292.0
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
9287.8
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
9244.5
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
9215.2
GTEX-X261-2326-SM-4PQYU
50-59 years, male
9083.6
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
8971.8
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
8955.7
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
8932.7
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
8914.8
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
8890.0
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
8768.8
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
8724.2
GTEX-V955-1926-SM-4KL1L
60-69 years, male
8686.6
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
8673.8
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
8574.5
GTEX-XPT6-1626-SM-4B655
20-29 years, male
8560.5
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
8510.7
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
8510.0
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
8501.3
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
8496.5
GTEX-13111-1526-SM-5EGJX
50-59 years, male
8452.3
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
8387.3
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
8385.9
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
8366.3
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
8355.5
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
8330.9
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
8212.7
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
8197.5
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
8117.6
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
8048.0
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
8045.5
GTEX-12696-0226-SM-5EGL3
60-69 years, male
8043.6
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
7993.4
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
7965.8
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
7950.2
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
7926.1
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
7642.5
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
7623.9
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
7616.7
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
7570.5
GTEX-R55D-0126-SM-48FEL
50-59 years, male
7554.4
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
7493.2
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
7468.2
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
7336.3
GTEX-S95S-1126-SM-4B64E
60-69 years, male
7314.1
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
7281.9
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
7252.8
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
7239.9
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
7231.8
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
7225.7
GTEX-R55C-1426-SM-48FED
40-49 years, male
7221.8
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
7204.1
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
7143.3
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
7045.6
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
7033.5
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
6993.1
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
6985.4
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
6969.9
GTEX-S33H-0126-SM-4AD62
30-39 years, male
6935.4
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
6864.9
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
6859.7
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
6785.0
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
6767.8
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
6732.8
GTEX-11OF3-1826-SM-5987N
60-69 years, male
6700.3
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
6639.6
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
6630.4
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
6605.6
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
6588.9
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
6575.3
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
6566.8
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
6525.1
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
6491.6
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
6486.5
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
6453.4
GTEX-QLQW-1026-SM-447A9
30-39 years, male
6309.7
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
6284.2
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
6264.8
GTEX-11DXZ-2126-SM-59881
50-59 years, male
6236.4
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
6236.0
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
6202.0
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
6180.2
GTEX-117XS-2026-SM-5GID1
60-69 years, male
6179.8
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
6138.6
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
6131.5
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
6121.4
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
6020.6
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
6013.5
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
5988.7
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
5980.1
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
5978.0
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
5946.0
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
5920.1
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
5917.7
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
5906.0
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
5896.5
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
5882.0
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
5881.8
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
5790.4
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
5711.8
GTEX-13112-0226-SM-5P9IV
50-59 years, male
5662.9
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
5598.3
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
5584.1
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
5582.9
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
5482.1
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
5480.2
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
5473.3
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
5464.3
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
5420.7
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
5403.8
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
5402.9
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
5388.7
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
5313.8
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
5305.7
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
5301.1
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
5253.6
GTEX-Y111-2426-SM-4TT23
50-59 years, male
5178.1
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
5118.5
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
5104.5
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
5069.3
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
5068.0
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
5047.0
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
5044.1
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
4962.0
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
4917.0
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
4912.6
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
4903.2
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
4870.7
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
4829.9
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
4798.1
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
4721.3
GTEX-REY6-0126-SM-48FDT
60-69 years, male
4719.8
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
4718.5
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
4714.4
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
4681.0
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
4624.7
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
4508.9
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
4477.5
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
4476.7
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
4460.9
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
4451.0
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
4355.9
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
4338.8
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
4275.6
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
4152.6
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
4145.4
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
4080.4
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
3796.7
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
3750.2
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
3487.8
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
3381.7
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
3348.1
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
3171.0
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
2289.0
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.