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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 11414.6
Min RPKM: 223.0
Std RPKM: 2484.1
Median RPKM: 4779.2
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
11414.6
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
9988.9
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
9568.4
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
9501.7
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
8965.8
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
8758.7
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
8449.4
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
8394.2
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
7782.7
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
7672.2
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
7664.6
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
7610.8
GTEX-QCQG-1426-SM-48U22
50-59 years, female
7560.8
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
6996.3
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
6993.1
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
6845.2
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
6658.3
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
6564.7
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
6542.0
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
6251.4
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
6208.3
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
6160.1
GTEX-11I78-1926-SM-59878
50-59 years, female
6125.0
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
6116.3
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
6021.4
GTEX-S32W-1226-SM-4AD67
50-59 years, female
5945.7
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
5871.4
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
5827.0
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
5780.5
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
5759.0
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
5699.7
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
5699.0
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
5672.2
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
5670.9
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
5644.6
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
5588.0
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
5520.7
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
5423.4
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
5368.0
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
5342.2
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
5341.3
GTEX-S341-0726-SM-4AD5R
40-49 years, female
5334.2
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
5333.8
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
5242.0
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
5107.2
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
5005.7
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
4979.1
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
4968.1
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
4779.2
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
4605.0
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
4604.5
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
4476.0
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
4475.9
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
4438.3
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
4429.7
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
3922.9
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
3895.7
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
3750.4
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
3742.2
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
3668.4
GTEX-Q734-0726-SM-48TZP
40-49 years, female
3651.0
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
3570.1
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
3473.9
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
3396.6
GTEX-P78B-1926-SM-3P616
40-49 years, female
3351.4
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
3286.9
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
3206.5
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
3146.0
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
2904.5
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
2881.1
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
2875.5
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
2726.9
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
2656.8
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
2650.9
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
2505.5
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
2029.4
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
2003.6
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
1981.4
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
1796.2
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
1762.6
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
1719.7
GTEX-RU72-2226-SM-46MUE
50-59 years, female
1654.8
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
1634.4
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
1590.0
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
1557.5
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
1303.4
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
907.5
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
884.0
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
823.1
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
794.1
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
747.4
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
714.9
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
701.2
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
675.5
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
607.4
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
461.3
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
223.0
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.