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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 46641.3
Min RPKM: 6818.6
Std RPKM: 8433.0
Median RPKM: 18081.8
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
46641.3
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
42391.6
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
37914.0
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
36947.7
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
36410.9
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
35846.8
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
34178.0
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
33960.2
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
32675.7
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
31981.1
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
30706.0
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
30649.2
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
29513.3
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
29196.4
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
29142.0
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
28806.9
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
27768.3
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
27077.6
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
26398.4
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
26386.1
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
26288.1
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
26084.4
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
25791.2
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
25139.9
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
24915.9
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
24696.3
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
24521.5
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
24252.5
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
23784.8
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
23322.5
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
23020.1
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
22977.5
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
22925.9
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
22688.3
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
22647.6
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
22569.3
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
21876.2
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
21194.1
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
20985.1
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
20863.4
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
20678.6
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
20320.0
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
20220.7
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
19160.9
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
18972.8
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
18629.3
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
18235.9
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
17927.8
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
17793.1
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
17291.7
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
17129.9
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
17050.6
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
16899.3
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
16767.0
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
16536.9
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
16478.2
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
16474.9
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
16463.7
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
16249.1
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
15822.8
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
15432.0
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
15348.5
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
15073.8
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
15021.3
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
14932.0
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
14760.8
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
14475.7
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
14028.9
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
13672.7
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
13595.1
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
13479.8
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
13220.0
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
12914.8
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
12638.8
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
12523.1
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
12483.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
11991.9
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
11722.0
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
11625.5
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
11602.9
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
11459.7
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
11453.2
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
11280.0
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
11200.0
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
10780.7
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
9996.6
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
9460.2
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
9078.2
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
8790.3
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
8750.8
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
8635.5
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
7961.1
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
7311.7
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
6818.6
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.