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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 8330.3
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 34209.9
Min RPKM: 2700.7
Std RPKM: 4715.0
Median RPKM: 15284.9
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
34209.9
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
32526.6
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
27540.6
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
25792.2
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
25051.0
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
22793.3
GTEX-11GSP-3226-SM-5986O
60-69 years, female
22709.7
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
22595.6
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
22473.5
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
22336.5
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
22214.9
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
21003.5
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
20985.8
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
20976.6
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
20230.1
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
20067.5
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
20043.9
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
19941.3
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
19197.1
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
19165.6
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
19160.0
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
19045.8
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
18869.8
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
18835.4
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
18711.8
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
18709.2
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
18665.9
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
18637.0
GTEX-145MF-2726-SM-5O995
50-59 years, male
18596.6
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
18588.3
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
17959.4
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
17885.6
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
17678.4
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
17676.7
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
17626.1
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
17599.6
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
17404.5
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
17212.2
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
17210.2
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
17165.0
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
17103.4
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
17067.4
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
16961.3
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
16775.9
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
16584.8
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
16424.7
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
16286.4
GTEX-1128S-2726-SM-5H12C
60-69 years, female
16233.3
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
16167.4
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
16088.9
GTEX-11PRG-2926-SM-5987A
50-59 years, male
15935.6
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
15696.4
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
15664.4
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
15554.0
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
15506.5
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
15448.6
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
15443.2
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
15126.6
GTEX-144FL-3026-SM-5O99C
50-59 years, male
15089.1
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
15047.1
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
15014.3
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
14858.0
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
14853.9
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
14678.9
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
14504.0
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
14367.4
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
14254.6
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
14109.6
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
13975.2
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
13938.5
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
13937.4
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
13811.2
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
13791.0
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
13516.4
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
13296.9
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
13265.1
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
13248.3
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
13138.1
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
13134.0
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
13119.6
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
13066.7
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
13058.3
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
12998.0
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
12899.0
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
12851.3
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
12849.2
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
12776.6
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
12772.1
GTEX-WL46-2926-SM-3LK82
50-59 years, male
12563.7
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
12471.8
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
12403.7
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
12168.6
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
12133.4
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
12057.9
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
11905.8
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
11832.1
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
11813.1
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
11789.3
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
11758.6
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
11724.4
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
11677.2
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
11667.1
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
11630.9
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
11465.3
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
10528.6
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
9575.6
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
9031.7
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
8999.5
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
8677.1
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
8444.1
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
8194.1
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
7546.8
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
7398.9
GTEX-X585-3026-SM-46MWF
50-59 years, male
2700.7
Show all
Brain - Frontal Cortex (BA9) RPKM: 12803.5
Samples: 108
Max RPKM: 28929.5
Min RPKM: 2092.6
Std RPKM: 5528.4
Median RPKM: 11988.1
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
28929.5
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
27655.1
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
26095.5
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
25635.3
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
25309.8
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
25153.3
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
24012.5
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
23147.6
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
22714.4
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
22390.0
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
21442.1
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
21345.9
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
21262.0
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
20091.3
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
19259.3
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
18598.4
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
18197.4
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
17996.2
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
17944.7
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
17623.0
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
16793.2
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
16666.8
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
16254.8
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
15816.1
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
15748.3
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
15338.8
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
15290.8
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
15212.5
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
14918.4
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
14509.6
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
14452.1
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
14379.7
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
14347.8
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
13763.0
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
13318.5
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
13270.4
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
13265.5
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
13242.0
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
13218.4
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
13193.2
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
13157.9
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
13073.2
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
13037.3
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
12985.0
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
12906.9
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
12905.4
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
12837.8
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
12723.5
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
12543.6
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
12331.0
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
12279.0
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
12155.7
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
12050.5
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
11990.4
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
11985.9
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
11829.9
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
11766.1
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
11661.8
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
11372.8
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
11072.6
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
10930.6
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
10919.2
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
10866.5
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
10863.5
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
10731.8
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
10546.9
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
10370.9
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
10048.3
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
10010.7
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
9934.0
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
9932.1
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
9862.2
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
9701.5
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
9686.1
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
9626.2
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
9583.8
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
9530.2
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
9367.5
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
9302.7
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
9242.1
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
9214.8
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
9155.9
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
9149.0
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
9094.9
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
9038.9
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
8948.7
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
8751.5
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
8502.5
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
8188.1
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
8117.5
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
7964.0
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
7915.4
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
7660.6
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
7660.4
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
7652.1
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
7241.5
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
6754.5
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
6744.6
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
6564.3
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
6223.8
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
5976.3
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
5781.2
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
5293.9
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
5265.7
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
5123.4
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
4697.9
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
2480.6
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
2092.6
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CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.