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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 59115.3
Min RPKM: 10776.9
Std RPKM: 9271.6
Median RPKM: 24885.9
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
59115.3
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
58090.1
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
48447.5
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
48401.1
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
45920.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
44148.4
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
43798.3
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
42746.1
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
41856.9
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
40049.2
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
39349.0
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
38174.8
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
37932.7
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
36758.9
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
36743.5
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
36504.2
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
36062.3
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
34802.2
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
34565.3
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
34352.4
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
34328.1
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
33396.1
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
32841.8
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
32140.7
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
32083.2
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
32025.7
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
31645.5
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
31330.0
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
31113.5
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
31103.1
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
31011.5
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
29954.7
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
29894.1
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
29706.7
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
29478.2
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
29439.4
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
29311.1
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
29240.5
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
29127.8
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
28873.0
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
28739.6
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
28192.0
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
28075.0
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
27955.3
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
27638.5
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
27207.0
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
27143.4
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
26965.6
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
26585.6
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
26575.4
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
25865.8
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
25710.9
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
25629.7
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
25559.9
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
25539.1
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
25421.0
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
25287.4
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
25268.6
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
24885.9
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
24785.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
24752.0
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
24546.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
24308.8
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
23995.3
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
23805.8
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
23420.2
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
22913.0
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
22845.6
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
22788.8
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
22766.2
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
22637.3
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
22604.2
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
22453.4
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
22379.6
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
22206.1
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
22140.5
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
22046.1
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
21890.2
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
21507.2
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
21376.8
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
21214.0
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
21185.6
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
21160.7
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
19253.2
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
19076.0
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
18989.5
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
18971.6
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
18897.8
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
18622.2
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
18405.6
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
18309.7
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
18168.1
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
17551.5
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
17478.2
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
17455.1
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
17396.8
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
17336.0
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
17278.5
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
17260.8
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
17223.6
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
17092.4
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
16494.0
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
16381.3
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
16368.3
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
16312.8
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
16140.1
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
16129.2
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
15707.1
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
15581.1
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
15107.9
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
15080.8
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
14642.1
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
13989.0
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
13185.6
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
12940.5
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
12680.9
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
10776.9
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.