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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 6144.5
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 8923.2
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 6162.3
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 24992.0
Min RPKM: 1951.8
Std RPKM: 4471.6
Median RPKM: 9428.4
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
24992.0
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
24717.8
GTEX-11P82-1326-SM-5HL62
20-29 years, male
21538.9
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
21282.5
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
21086.5
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
20054.8
GTEX-QVJO-1826-SM-447C9
60-69 years, female
19795.8
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
19598.9
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
19524.8
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
18853.2
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
18762.0
GTEX-R55D-0826-SM-48FEA
50-59 years, male
18591.4
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
18516.8
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
18508.9
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
18075.3
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
17238.5
GTEX-117XS-1926-SM-5GICO
60-69 years, male
17236.2
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
17177.4
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
16934.7
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
16849.2
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
16840.3
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
16680.7
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
16648.3
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
16338.5
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
16318.2
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
16046.7
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
16000.4
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
15808.3
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
15665.6
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
15490.1
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
15197.9
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
14944.7
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
14709.5
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
14672.6
GTEX-144GM-0926-SM-5O994
20-29 years, male
14623.2
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
14561.8
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
14511.0
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
14341.8
GTEX-REY6-2426-SM-48FF5
60-69 years, male
14262.9
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
14186.5
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
14170.6
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
14141.5
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
14088.8
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
14085.8
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
14032.9
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
13568.2
GTEX-X261-0626-SM-3NMD9
50-59 years, male
13561.0
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
13108.6
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
13107.3
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
13024.9
GTEX-117YX-1426-SM-5H12H
50-59 years, male
12916.8
GTEX-WFON-1826-SM-3GILG
40-49 years, male
12855.0
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
12775.7
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
12707.7
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
12675.3
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
12546.2
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
12485.3
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
12438.4
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
12419.5
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
12401.0
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
12316.0
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
12242.4
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
12192.1
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
12190.8
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
12151.0
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
12058.9
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
11943.0
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
11928.0
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
11858.7
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
11651.9
GTEX-1122O-1226-SM-5H113
60-69 years, female
11588.6
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
11507.1
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
11297.6
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
11276.0
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
11265.2
GTEX-111YS-1926-SM-5GICC
60-69 years, male
11264.3
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
11223.5
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
11185.9
GTEX-R53T-1526-SM-48FEK
50-59 years, female
11146.4
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
11139.5
GTEX-11P81-1926-SM-5BC53
30-39 years, female
11113.2
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
11073.5
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
11048.3
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
11003.9
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
10991.8
GTEX-13113-1726-SM-5GCOO
60-69 years, female
10911.1
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
10906.4
GTEX-14753-2426-SM-5LU8U
60-69 years, male
10787.7
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
10778.7
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
10754.9
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
10570.7
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
10312.8
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
10275.7
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
10213.1
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
10210.5
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
10082.4
GTEX-TML8-1226-SM-32QON
40-49 years, female
10049.1
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
10049.0
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
10023.0
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
9800.6
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
9790.9
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
9698.0
GTEX-11OF3-1926-SM-59889
60-69 years, male
9658.6
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
9597.7
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
9570.7
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
9519.2
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
9484.1
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
9372.7
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
9302.9
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
9293.1
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
9201.3
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
9167.4
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
9162.3
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
9154.0
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
9009.0
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
8990.9
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
8972.5
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
8926.6
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
8875.7
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
8836.5
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
8798.6
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
8728.6
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
8592.1
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
8531.6
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
8484.6
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
8460.9
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
8424.2
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
8332.8
GTEX-1192X-2326-SM-5987X
50-59 years, male
8314.7
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
8290.0
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
8271.1
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
8240.1
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
8166.4
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
8061.4
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
8029.5
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
8007.4
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
7989.0
GTEX-11EI6-0626-SM-5985T
60-69 years, male
7806.0
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
7790.2
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
7763.5
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
7740.3
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
7676.8
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
7622.2
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
7520.2
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
7513.7
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
7463.7
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
7340.3
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
7328.1
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
7265.1
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
7161.5
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
7152.6
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
7099.2
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
7004.2
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
6966.5
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
6920.6
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
6862.3
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
6832.2
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
6810.7
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
6796.5
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
6792.1
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
6746.8
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
6733.5
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
6642.1
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
6637.0
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
6636.6
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
6588.1
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
6563.6
GTEX-QEL4-2126-SM-447AE
50-59 years, male
6544.1
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
6516.0
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
6491.9
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
6489.4
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
6368.2
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
6226.9
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
6214.6
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
5996.2
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
5887.6
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
5885.6
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
5858.2
GTEX-XBED-1626-SM-47JYN
60-69 years, male
5746.5
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
5677.3
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
5630.1
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
5599.0
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
5586.8
GTEX-T6MN-0726-SM-32PML
50-59 years, male
5561.4
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
5539.7
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
5411.9
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
5362.3
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
5342.7
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
5300.1
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
5296.4
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
5284.7
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
5213.9
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
5202.2
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
5085.6
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
5044.7
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
5034.8
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
4943.7
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
4865.6
GTEX-S341-1526-SM-4AD6K
40-49 years, female
4861.1
GTEX-RU72-0626-SM-46MUI
50-59 years, female
4781.4
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
4606.0
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
4588.9
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
4519.1
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
4470.1
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
4429.5
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
4251.4
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
3933.7
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
3904.9
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
3744.7
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
3339.1
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
3116.6
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
2729.2
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
2652.2
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
1951.8
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.