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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 12261.7
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 15050.7
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 10642.5
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 11250.4
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 12017.2
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 12736.2
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 19633.5
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 16078.2
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 16584.9
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 22227.5
Min RPKM: 5685.0
Std RPKM: 3155.1
Median RPKM: 11107.4
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
22227.5
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
20477.3
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
19572.9
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
19538.4
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
18941.9
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
18690.6
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
18631.6
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
18399.0
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
18206.2
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
17720.6
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
17544.4
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
17393.1
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
17290.9
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
17080.1
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
16797.8
GTEX-RN64-2326-SM-48FDW
50-59 years, male
16670.7
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
16498.5
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
16475.0
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
16247.6
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
16196.0
GTEX-13111-1526-SM-5EGJX
50-59 years, male
16178.3
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
16088.3
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
16071.4
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
15606.7
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
15546.7
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
15498.6
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
15282.6
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
15257.5
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
14996.1
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
14889.8
GTEX-11DXZ-2126-SM-59881
50-59 years, male
14418.6
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
14325.8
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
14169.1
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
14149.5
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
14084.1
GTEX-X261-2326-SM-4PQYU
50-59 years, male
13971.4
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
13844.6
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
13766.8
GTEX-12696-0226-SM-5EGL3
60-69 years, male
13586.6
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
13543.1
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
13512.4
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
13480.0
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
13418.3
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
13366.7
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
13349.1
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
13096.0
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
13074.7
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
12998.8
GTEX-XPT6-1626-SM-4B655
20-29 years, male
12978.9
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
12938.8
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
12891.2
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
12763.1
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
12727.0
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
12671.4
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
12662.6
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
12658.6
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
12656.0
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
12519.9
GTEX-S95S-1126-SM-4B64E
60-69 years, male
12397.1
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
12219.2
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
12155.5
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
12118.5
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
11963.0
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
11961.1
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
11960.4
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
11891.1
GTEX-R55C-1426-SM-48FED
40-49 years, male
11833.2
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
11744.1
GTEX-QLQW-1026-SM-447A9
30-39 years, male
11581.5
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
11572.5
GTEX-V955-1926-SM-4KL1L
60-69 years, male
11568.3
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
11536.1
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
11534.3
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
11495.6
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
11468.1
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
11347.7
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
11302.1
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
11286.9
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
11258.0
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
11254.7
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
11244.6
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
11207.3
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
11199.0
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
11131.6
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
11115.9
GTEX-11OF3-1826-SM-5987N
60-69 years, male
11107.8
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
11107.0
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
11084.6
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
11067.4
GTEX-13112-0226-SM-5P9IV
50-59 years, male
11064.4
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
11056.6
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
11053.6
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
11052.3
GTEX-Y111-2426-SM-4TT23
50-59 years, male
11014.5
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
10988.0
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
10985.1
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
10969.8
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
10965.1
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
10890.1
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
10883.7
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
10789.9
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
10764.3
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
10738.6
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
10691.0
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
10662.0
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
10650.2
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
10624.1
GTEX-117XS-2026-SM-5GID1
60-69 years, male
10574.5
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
10543.2
GTEX-R55D-0126-SM-48FEL
50-59 years, male
10516.3
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
10494.2
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
10439.4
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
10336.7
GTEX-S33H-0126-SM-4AD62
30-39 years, male
10213.2
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
10186.7
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
10161.2
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
10101.6
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
10080.1
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
10021.8
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
10011.4
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
9932.7
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
9926.7
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
9897.0
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
9859.3
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
9785.8
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
9758.1
GTEX-REY6-0126-SM-48FDT
60-69 years, male
9709.1
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
9528.5
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
9500.6
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
9438.4
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
9421.7
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
9382.6
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
9368.8
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
9348.7
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
9278.9
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
9266.2
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
9228.5
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
9132.9
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
9127.5
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
9064.4
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
8973.6
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
8912.1
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
8875.4
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
8796.3
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
8753.5
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
8744.2
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
8653.2
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
8625.0
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
8581.9
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
8581.5
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
8563.0
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
8562.6
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
8536.7
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
8504.3
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
8426.3
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
8415.9
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
8032.7
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
7904.6
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
7888.2
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
7868.1
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
7584.0
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
7546.8
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
7330.9
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
7324.1
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
7189.6
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
7009.3
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
6967.4
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
6801.1
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
6762.6
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
6712.8
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
5792.1
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
5685.0
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.