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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 17858.8
Min RPKM: 4937.6
Std RPKM: 2774.3
Median RPKM: 11523.4
GTEX-QCQG-0226-SM-48U28
50-59 years, female
17858.8
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
17832.1
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
17497.2
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
17306.9
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
17230.0
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
17195.9
GTEX-13111-0126-SM-5EGHO
50-59 years, male
17079.7
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
16456.8
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
16309.7
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
16271.6
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
15933.8
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
15909.4
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
15520.8
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
15229.5
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
14969.3
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
14905.6
GTEX-QV31-0126-SM-447BP
30-39 years, male
14649.3
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
14568.6
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
14434.6
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
14255.5
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
14230.7
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
14166.2
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
13919.2
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
13859.1
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
13788.6
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
13697.4
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
13649.2
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
13416.3
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
13300.9
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
13247.2
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
12936.9
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
12847.4
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
12827.9
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
12827.6
GTEX-QLQW-0126-SM-447BK
30-39 years, male
12694.2
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
12231.7
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
12223.7
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
12183.7
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
12167.5
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
12033.2
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
11999.1
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
11938.6
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
11920.3
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
11859.7
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
11742.4
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
11728.9
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
11695.5
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
11685.3
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
11664.3
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
11613.6
GTEX-PX3G-0926-SM-48U12
20-29 years, female
11587.7
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
11534.6
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
11512.2
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
11275.1
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
11238.5
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
11205.3
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
11143.8
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
11141.1
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
11106.5
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
11070.3
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
10785.0
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
10734.8
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
10689.8
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
10677.2
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
10503.3
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
10453.7
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
10412.6
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
10401.7
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
10334.8
GTEX-144GN-2126-SM-5O99D
50-59 years, male
10313.1
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
10266.1
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
10183.7
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
10180.0
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
10112.1
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
10021.2
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
9898.9
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
9891.8
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
9841.7
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
9756.5
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
9755.4
GTEX-Q734-0226-SM-48U1A
40-49 years, female
9738.5
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
9675.9
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
9549.3
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
9467.0
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
9434.2
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
9425.4
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
9360.9
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
9295.6
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
9261.6
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
9028.9
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
8916.2
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
8888.5
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
8410.1
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
8332.7
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
8156.8
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
8116.6
GTEX-R55G-0226-SM-48FEI
40-49 years, female
8065.6
GTEX-X585-1826-SM-4QAS3
50-59 years, male
7923.3
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
7809.8
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
7388.3
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
7137.5
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
6685.8
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
6477.6
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
4937.6
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.