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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 12587.9
Min RPKM: 807.7
Std RPKM: 2446.7
Median RPKM: 5421.5
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
12587.9
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
10395.4
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
9624.1
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
9260.1
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
9235.7
GTEX-QCQG-1426-SM-48U22
50-59 years, female
9193.9
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
8602.1
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
8416.4
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
8244.6
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
8136.0
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
7943.9
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
7788.2
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
7660.9
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
7535.0
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
7495.2
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
7191.3
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
7116.0
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
6985.7
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
6980.2
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
6971.5
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
6848.0
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
6837.9
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
6819.2
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
6801.5
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
6786.4
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
6509.5
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
6499.2
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
6474.8
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
6255.8
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
6247.6
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
6190.9
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
6161.3
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
5963.9
GTEX-11I78-1926-SM-59878
50-59 years, female
5939.1
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
5929.7
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
5897.3
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
5836.4
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
5815.7
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
5792.7
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
5731.2
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
5714.4
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
5697.3
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
5681.6
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
5621.3
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
5547.2
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
5536.1
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
5501.3
GTEX-S32W-1226-SM-4AD67
50-59 years, female
5495.3
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
5421.5
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
5041.9
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
4853.7
GTEX-S341-0726-SM-4AD5R
40-49 years, female
4833.8
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
4771.8
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
4726.3
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
4377.5
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
4116.2
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
4058.0
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
3967.0
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
3876.1
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
3808.0
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
3794.8
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
3759.0
GTEX-P78B-1926-SM-3P616
40-49 years, female
3740.0
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
3702.8
GTEX-Q734-0726-SM-48TZP
40-49 years, female
3684.0
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
3620.8
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
3571.1
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
3541.9
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
3508.7
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
3489.1
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
3396.4
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
3337.5
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
3315.3
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
3306.9
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
3136.6
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
3035.0
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
2935.7
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
2792.9
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
2676.4
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
2596.2
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
2321.2
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
2106.9
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
2057.4
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
1985.8
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
1834.0
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
1827.5
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
1694.5
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
1511.9
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
1479.6
GTEX-RU72-2226-SM-46MUE
50-59 years, female
1387.2
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
1253.4
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
1100.2
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
1037.5
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
921.5
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
872.4
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
858.2
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
807.7
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.