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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 89020.9
Min RPKM: 5095.6
Std RPKM: 17688.2
Median RPKM: 39253.5
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
89020.9
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
75973.8
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
75545.6
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
72612.4
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
71436.6
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
70915.2
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
69158.9
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
67299.8
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
66665.8
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
63835.1
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
62826.9
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
62816.5
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
62815.1
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
62300.6
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
61113.2
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
59210.0
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
58567.9
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
57812.6
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
57544.0
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
57085.1
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
55895.6
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
54156.8
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
52950.2
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
52112.2
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
52074.9
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
51764.2
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
50413.8
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
50031.7
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
49861.5
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
49046.7
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
47775.9
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
47050.2
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
45373.0
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
44970.2
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
44447.8
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
43909.6
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
43863.9
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
43101.5
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
43029.6
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
42857.3
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
42844.3
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
42658.8
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
42346.5
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
41157.6
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
40023.9
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
39838.2
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
39591.3
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
38915.8
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
38758.9
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
38679.5
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
38286.4
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
38118.7
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
38048.1
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
37895.2
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
37581.6
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
37486.4
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
37233.8
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
37103.4
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
36694.6
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
36678.7
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
36649.1
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
35668.7
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
34559.0
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
34105.3
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
33648.7
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
29516.8
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
29351.4
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
29292.9
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
29167.8
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
28711.8
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
27484.2
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
26508.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
26247.6
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
25876.6
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
25845.1
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
22854.9
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
22492.7
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
22186.0
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
22018.4
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
21251.8
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
20902.7
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
20132.0
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
19634.9
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
19321.6
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
18805.0
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
16824.3
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
16811.5
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
16643.7
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
14618.6
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
10473.3
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
10289.3
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
6968.8
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
6782.9
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
5095.6
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.