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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 85093.4
Min RPKM: 5525.5
Std RPKM: 17558.4
Median RPKM: 43402.0
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
85093.4
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
76888.6
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
75619.3
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
74634.4
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
73416.0
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
72983.7
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
70275.4
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
69693.9
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
68164.3
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
68151.5
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
68000.3
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
65151.8
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
63359.2
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
62283.6
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
62209.5
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
59618.0
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
59362.8
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
58905.2
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
58892.0
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
58295.3
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
57833.4
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
57706.6
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
57012.4
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
56268.7
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
55476.5
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
55349.6
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
55074.3
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
54768.3
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
54553.5
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
54190.9
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
53875.5
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
52819.1
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
52746.5
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
52008.5
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
51793.6
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
51777.7
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
51577.8
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
51433.4
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
50685.8
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
49827.4
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
49539.7
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
49168.0
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
48892.7
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
48522.9
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
48516.9
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
47128.1
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
47002.1
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
45856.8
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
45491.1
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
45451.4
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
44672.0
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
44444.5
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
44306.9
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
44248.0
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
44218.9
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
44101.4
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
43781.1
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
43437.5
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
43402.0
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
43277.9
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
43105.4
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
42996.9
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
42751.1
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
42167.0
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
41892.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
41575.7
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
40351.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
40128.5
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
39031.5
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
38624.8
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
38581.9
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
38062.2
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
37797.2
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
37640.9
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
37040.4
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
36858.9
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
36811.3
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
36750.4
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
36313.7
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
34929.0
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
34692.4
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
34145.3
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
33598.4
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
33565.5
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
33254.7
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
33036.1
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
32883.3
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
31793.7
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
31728.4
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
31691.7
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
31532.0
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
30960.0
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
30806.9
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
30711.6
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
29475.5
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
27278.2
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
26563.6
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
26333.4
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
26245.3
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
24949.2
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
24844.0
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
22018.1
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
20547.4
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
18425.4
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
14560.1
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
12737.6
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
12232.0
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
11712.1
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
10621.7
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
10583.0
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
8533.9
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
7737.7
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
7339.6
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
7044.4
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
6139.2
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
5809.2
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
5525.5
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.