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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 11350.5
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 20938.4
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 13421.9
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 38247.7
Min RPKM: 1019.8
Std RPKM: 5797.5
Median RPKM: 11644.7
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
38247.7
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
30358.7
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
29102.3
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
27808.9
GTEX-11P82-1326-SM-5HL62
20-29 years, male
27235.4
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
26986.4
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
26535.4
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
25069.0
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
25044.1
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
24799.7
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
24230.9
GTEX-117XS-1926-SM-5GICO
60-69 years, male
23678.2
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
23565.8
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
23376.9
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
22643.4
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
22572.5
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
21988.0
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
21899.0
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
21141.1
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
21122.9
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
20989.6
GTEX-QVJO-1826-SM-447C9
60-69 years, female
20673.8
GTEX-144GM-0926-SM-5O994
20-29 years, male
20593.5
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
20175.7
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
20059.3
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
19925.4
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
19490.6
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
19485.7
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
19485.3
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
19395.1
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
19375.8
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
19375.0
GTEX-R55D-0826-SM-48FEA
50-59 years, male
19251.1
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
19108.1
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
18432.8
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
18200.8
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
18112.3
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
18022.1
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
18004.8
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
17909.2
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
17886.6
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
17801.6
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
17713.2
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
17654.5
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
17490.1
GTEX-117YX-1426-SM-5H12H
50-59 years, male
17454.7
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
17408.3
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
17089.3
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
16544.0
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
16351.0
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
16336.4
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
16233.7
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
16196.2
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
15876.2
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
15874.4
GTEX-13113-1726-SM-5GCOO
60-69 years, female
15848.8
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
15848.8
GTEX-REY6-2426-SM-48FF5
60-69 years, male
15809.7
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
15761.2
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
15600.3
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
15422.2
GTEX-1122O-1226-SM-5H113
60-69 years, female
15238.5
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
15141.7
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
15124.5
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
15083.0
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
14921.0
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
14891.4
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
14891.2
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
14861.0
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
14829.6
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
14789.7
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
14674.9
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
14619.8
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
14569.1
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
14568.4
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
14479.0
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
14422.2
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
14340.8
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
14321.3
GTEX-WFON-1826-SM-3GILG
40-49 years, male
14310.3
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
14288.0
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
14243.6
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
14155.8
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
14153.1
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
14007.8
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
14001.0
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
13962.7
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
13861.2
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
13817.8
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
13740.2
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
13674.5
GTEX-11P81-1926-SM-5BC53
30-39 years, female
13601.1
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
13560.8
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
13396.2
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
13320.7
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
13220.3
GTEX-111YS-1926-SM-5GICC
60-69 years, male
13202.3
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
13124.8
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
13124.1
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
12547.2
GTEX-X261-0626-SM-3NMD9
50-59 years, male
12250.6
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
12191.1
GTEX-14753-2426-SM-5LU8U
60-69 years, male
12175.5
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
12096.3
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
11998.5
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
11902.0
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
11726.0
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
11563.4
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
11553.6
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
11507.9
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
11502.4
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
11406.7
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
11373.7
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
11372.0
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
11286.9
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
11214.0
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
11203.6
GTEX-R53T-1526-SM-48FEK
50-59 years, female
11143.7
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
10869.1
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
10862.6
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
10839.7
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
10836.3
GTEX-11OF3-1926-SM-59889
60-69 years, male
10827.3
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
10778.8
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
10640.9
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
10631.3
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
10565.6
GTEX-1192X-2326-SM-5987X
50-59 years, male
10515.4
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
10492.3
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
10474.9
GTEX-11EI6-0626-SM-5985T
60-69 years, male
10474.4
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
10327.9
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
10194.7
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
10193.2
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
10156.2
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
10047.9
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
10027.2
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
9991.9
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
9936.5
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
9936.2
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
9882.1
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
9873.3
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
9865.4
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
9739.0
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
9650.2
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
9528.1
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
9436.7
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
9426.6
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
9388.0
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
9335.3
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
9311.4
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
9111.5
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
9080.4
GTEX-TML8-1226-SM-32QON
40-49 years, female
8972.4
GTEX-QEL4-2126-SM-447AE
50-59 years, male
8812.1
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
8786.8
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
8718.5
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
8671.5
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
8670.9
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
8577.7
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
8530.0
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
8508.4
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
8457.5
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
8419.1
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
8396.9
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
8390.5
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
8177.8
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
8087.4
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
8079.3
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
7979.7
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
7946.5
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
7918.1
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
7818.0
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
7774.4
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
7771.6
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
7767.5
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
7761.8
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
7752.8
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
7735.1
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
7721.8
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
7670.6
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
7519.2
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
7467.6
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
7250.6
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
7198.6
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
7183.6
GTEX-XBED-1626-SM-47JYN
60-69 years, male
7077.8
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
6907.5
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
6805.5
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
6745.2
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
6619.4
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
6562.4
GTEX-T6MN-0726-SM-32PML
50-59 years, male
6514.2
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
6505.3
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
6461.3
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
6408.4
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
6187.1
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
6162.7
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
6159.1
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
6117.5
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
6012.9
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
5862.1
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
5842.6
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
5827.2
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
5810.7
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
5638.7
GTEX-S341-1526-SM-4AD6K
40-49 years, female
5382.6
GTEX-RU72-0626-SM-46MUI
50-59 years, female
5217.2
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
4981.7
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
4872.1
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
4668.8
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
4495.9
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
4117.6
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
1019.8
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.