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MT-ND6
COLON - Expression summary
RNA expressioni
HPA:2661.5TPM
GTEx:3755.8RPKM
FANTOM5:34.4Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 2661.5
overview Male, age 54 Sample 1
TPM: 5651.6
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 5508.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 5687.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 11083.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 6028.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 107.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 103.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 77.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 64.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 31.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 53.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 130.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 70.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 3755.8
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 2755.8
Samples: 149

Max RPKM: 8414.3
Min RPKM: 315.4
Std RPKM: 2142.5
Median RPKM: 1884.1
GTEX-1211K-1826-SM-5EGJ2 60-69 years, female 8414.3
GTEX-ZA64-1426-SM-5CVMC 20-29 years, male 8261.8
GTEX-11ZTT-1626-SM-5EQKR 60-69 years, female 7680.5
GTEX-ZZ64-0826-SM-5E449 20-29 years, male 7635.6
GTEX-11DXZ-1626-SM-5GIDI 50-59 years, male 7626.3
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 7349.8
GTEX-13OVI-2126-SM-5KM3U 60-69 years, female 7295.2
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 6677.3
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 6440.6
GTEX-Y3I4-1126-SM-4TT7Y 50-59 years, male 6328.6
Show all
Colon - Transverse
RPKM: 4516.0
Samples: 196

Max RPKM: 19338.5
Min RPKM: 217.9
Std RPKM: 2944.9
Median RPKM: 4084.4
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 19338.5
GTEX-ZPIC-2226-SM-57WDX 40-49 years, female 13629.6
GTEX-ZT9W-1826-SM-51MQX 50-59 years, male 11638.0
GTEX-1211K-1726-SM-5FQUJ 60-69 years, female 11501.4
GTEX-YB5E-1626-SM-5IFIQ 40-49 years, male 11208.7
GTEX-13QBU-1826-SM-5IJG3 40-49 years, female 10669.7
GTEX-13D11-0826-SM-5KLZJ 50-59 years, female 10655.6
GTEX-YEC3-2426-SM-5IFJR 50-59 years, male 10487.1
GTEX-11I78-1226-SM-5A5K6 50-59 years, female 10162.7
GTEX-13O61-1626-SM-5KM3T 60-69 years, male 10123.3
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 34.4
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 45.3
FF:10014-101C5 62,83,84 years, mixed 34.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.