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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 64.6
Min RPKM: 3.7
Std RPKM: 17.2
Median RPKM: 28.8
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
64.6
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
64.1
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
63.1
GTEX-111YS-1426-SM-5GID8
60-69 years, male
61.9
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
61.0
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
60.6
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
59.6
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
59.1
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
58.2
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
58.1
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
53.6
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
50.3
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
49.5
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
48.8
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
48.4
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
46.7
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
46.2
GTEX-1122O-1326-SM-5H11F
60-69 years, female
45.7
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
45.6
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
45.3
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
44.9
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
43.5
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
42.1
GTEX-ZTSS-0926-SM-59865
40-49 years, male
42.1
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
41.8
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
41.2
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
41.2
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
40.8
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
40.8
GTEX-13113-1226-SM-5EGHT
60-69 years, female
40.1
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
39.8
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
38.2
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
38.2
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
33.7
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
33.3
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
32.9
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
32.4
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
31.7
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
30.8
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
30.7
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
30.7
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
30.4
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
30.1
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
29.0
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
28.6
GTEX-13O61-1326-SM-5KM31
60-69 years, male
28.3
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
28.2
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
27.1
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
25.9
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
25.4
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
24.8
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
23.1
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
22.7
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
21.4
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
21.4
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
20.3
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
20.0
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
19.0
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
17.9
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
17.9
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
17.3
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
16.3
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
16.2
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
15.0
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
14.4
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
14.1
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
13.5
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
13.3
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
12.8
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
12.7
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
12.4
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
12.4
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
12.4
GTEX-1192X-2526-SM-59868
50-59 years, male
11.6
GTEX-117YX-0326-SM-5GICL
50-59 years, male
10.9
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
10.2
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
10.0
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
9.9
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
9.8
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
8.7
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
8.1
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
7.3
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
6.8
GTEX-13111-1426-SM-5DUW3
50-59 years, male
6.3
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
6.0
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
5.0
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
4.8
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
3.7
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.