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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 825.7
Min RPKM: 84.8
Std RPKM: 189.2
Median RPKM: 308.3
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
825.7
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
800.3
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
706.3
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
669.4
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
664.6
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
641.1
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
616.2
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
610.6
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
610.4
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
592.9
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
592.4
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
589.9
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
588.2
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
583.6
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
579.3
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
568.1
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
561.4
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
548.0
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
543.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
542.1
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
536.2
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
534.3
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
523.4
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
501.9
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
496.9
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
472.8
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
460.2
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
447.9
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
437.0
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
431.0
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
429.3
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
396.7
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
386.9
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
379.5
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
376.3
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
364.3
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
360.6
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
344.7
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
344.2
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
339.8
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
328.2
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
321.1
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
320.9
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
319.3
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
312.4
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
309.0
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
308.7
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
307.9
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
296.2
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
286.4
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
285.5
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
283.8
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
280.5
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
276.1
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
251.9
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
247.3
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
239.0
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
235.6
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
233.6
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
232.5
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
222.3
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
221.7
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
216.2
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
212.7
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
211.5
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
204.1
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
199.5
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
196.2
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
166.4
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
163.7
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
163.0
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
158.6
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
148.0
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
146.2
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
142.7
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
138.1
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
136.1
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
132.8
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
132.5
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
129.3
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
126.3
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
123.6
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
123.2
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
119.6
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
116.9
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
116.8
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
109.8
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
109.8
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
105.9
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
103.5
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
94.6
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
90.0
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
89.0
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
84.8
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.