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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 10.9
Min RPKM: 1.8
Std RPKM: 1.7
Median RPKM: 5.1
GTEX-XGQ4-1826-SM-4AT6F
50-59 years, male
10.9
GTEX-WFG8-1826-SM-4LVM4
20-29 years, male
9.9
GTEX-12ZZZ-2026-SM-5LZWJ
60-69 years, male
9.6
GTEX-U412-2026-SM-4DXSI
60-69 years, male
9.3
GTEX-12BJ1-1226-SM-5LUAE
60-69 years, male
9.0
GTEX-13G51-2326-SM-5LZXV
60-69 years, male
8.2
GTEX-Q2AI-1126-SM-48U19
40-49 years, male
8.2
GTEX-ZLFU-1726-SM-4WWBU
40-49 years, male
8.1
GTEX-QV44-1526-SM-4R1KI
50-59 years, male
8.0
GTEX-U3ZM-0926-SM-4DXSW
40-49 years, male
7.8
GTEX-UTHO-2726-SM-4JBH9
60-69 years, male
7.7
GTEX-11OF3-1726-SM-5GU5Q
60-69 years, male
7.6
GTEX-OOBJ-2026-SM-3NB1R
60-69 years, male
7.6
GTEX-13RTJ-2126-SM-5S2PZ
60-69 years, male
7.3
GTEX-1399T-1226-SM-5P9J5
60-69 years, male
6.9
GTEX-WFON-1626-SM-4LVMV
40-49 years, male
6.9
GTEX-ZTX8-1026-SM-5EGHD
20-29 years, male
6.9
GTEX-11ZUS-2126-SM-5N9E6
30-39 years, male
6.8
GTEX-111CU-1526-SM-5N9FS
50-59 years, male
6.7
GTEX-11DYG-2526-SM-5N9BB
60-69 years, male
6.7
GTEX-12696-2226-SM-5EQ65
60-69 years, male
6.7
GTEX-13N2G-1826-SM-5KM1I
60-69 years, male
6.7
GTEX-NPJ8-2426-SM-3MJHL
40-49 years, male
6.7
GTEX-146FQ-1726-SM-5QGPX
30-39 years, male
6.6
GTEX-S4Q7-1026-SM-4AD75
20-29 years, male
6.6
GTEX-145LV-1226-SM-5S2QH
50-59 years, male
6.5
GTEX-T8EM-1826-SM-4DM7F
40-49 years, male
6.4
GTEX-QMRM-1426-SM-4R1K8
50-59 years, male
6.2
GTEX-XAJ8-0626-SM-47JY4
40-49 years, male
6.2
GTEX-ZPU1-2026-SM-57WFI
40-49 years, male
6.2
GTEX-132QS-1126-SM-5P9GC
60-69 years, male
6.1
GTEX-139T6-1526-SM-5P9G6
50-59 years, male
6.1
GTEX-14C5O-2826-SM-5RQI6
60-69 years, male
6.1
GTEX-S95S-1026-SM-4B64M
60-69 years, male
6.1
GTEX-WH7G-1726-SM-4LVKY
40-49 years, male
6.1
GTEX-14ABY-0726-SM-5Q5DF
50-59 years, male
6.0
GTEX-WFG7-1826-SM-3GIL1
20-29 years, male
6.0
GTEX-13NYS-1026-SM-5KLZT
60-69 years, male
5.9
GTEX-11NSD-0826-SM-5986S
20-29 years, male
5.8
GTEX-13O61-1726-SM-5KM46
60-69 years, male
5.8
GTEX-QLQ7-1326-SM-4R1JY
60-69 years, male
5.8
GTEX-11P7K-0626-SM-5985Z
30-39 years, male
5.7
GTEX-XPVG-2026-SM-4B65E
50-59 years, male
5.4
GTEX-XQ3S-2526-SM-4BOOG
20-29 years, male
5.4
GTEX-13O21-1126-SM-5N9EV
50-59 years, male
5.3
GTEX-13111-1326-SM-5GCNO
50-59 years, male
5.2
GTEX-QEG4-2226-SM-4R1JM
30-39 years, male
5.2
GTEX-RM2N-1126-SM-48FCY
50-59 years, male
5.2
GTEX-YB5E-1826-SM-5IFI4
40-49 years, male
5.2
GTEX-ZT9W-1626-SM-4YCDQ
50-59 years, male
5.2
GTEX-ZUA1-2826-SM-59HLE
40-49 years, male
5.2
GTEX-13FHO-2826-SM-5K7ZA
60-69 years, male
5.1
GTEX-13OW8-0426-SM-5J2NR
60-69 years, male
5.1
GTEX-148VJ-1826-SM-5Q5DV
70-79 years, male
5.1
GTEX-ZTTD-2726-SM-57WFA
50-59 years, male
5.1
GTEX-SNMC-0926-SM-4DM5U
20-29 years, male
5.0
GTEX-YF7O-1926-SM-4W1YQ
50-59 years, male
5.0
GTEX-117YW-1426-SM-5EGGO
50-59 years, male
4.9
GTEX-131XF-1926-SM-5DUW4
60-69 years, male
4.9
GTEX-SNOS-1026-SM-4DM4Y
40-49 years, male
4.9
GTEX-WZTO-0926-SM-4PQZ3
40-49 years, male
4.9
GTEX-14BMV-2326-SM-5RQJ4
50-59 years, male
4.8
GTEX-V1D1-1926-SM-4JBGX
50-59 years, male
4.8
GTEX-WK11-2626-SM-4OOSK
50-59 years, male
4.8
GTEX-13FTW-1226-SM-5LZZ1
40-49 years, male
4.7
GTEX-11EQ9-1726-SM-5HL6U
30-39 years, male
4.6
GTEX-V955-1826-SM-4JBIL
60-69 years, male
4.6
GTEX-OIZH-2026-SM-3NB1M
50-59 years, male
4.5
GTEX-OOBK-2025-SM-3LK5S
40-49 years, male
4.4
GTEX-Y8E4-2126-SM-5RQHO
40-49 years, male
4.4
GTEX-111FC-2026-SM-5GZYO
60-69 years, male
4.3
GTEX-111YS-1726-SM-5GIED
60-69 years, male
4.2
GTEX-11TT1-2026-SM-5EQM8
20-29 years, male
4.2
GTEX-132NY-2826-SM-5P9G2
60-69 years, male
4.2
GTEX-14E6E-1126-SM-5S2R4
30-39 years, male
4.2
GTEX-PLZ6-1126-SM-3P5ZR
30-39 years, male
4.2
GTEX-13FXS-2826-SM-5LZYC
50-59 years, male
4.1
GTEX-RWSA-2026-SM-47JX8
40-49 years, male
4.1
GTEX-XMK1-1026-SM-4B65H
40-49 years, male
4.1
GTEX-1399R-0526-SM-5IJEF
30-39 years, male
3.9
GTEX-U4B1-1426-SM-4DXTX
40-49 years, male
3.9
GTEX-VJYA-1226-SM-3GIJ6
60-69 years, male
3.9
GTEX-QV31-1026-SM-4R1K3
30-39 years, male
3.8
GTEX-WOFM-0326-SM-4OOSL
20-29 years, male
3.8
GTEX-ZZ64-0926-SM-5E44L
20-29 years, male
3.8
GTEX-11O72-2726-SM-5HL6K
40-49 years, male
3.7
GTEX-X5EB-1826-SM-4E3K8
40-49 years, male
3.7
GTEX-ZY6K-1526-SM-5GZXE
50-59 years, male
3.7
GTEX-11P82-1126-SM-5BC5K
20-29 years, male
3.5
GTEX-S3XE-1326-SM-4AD4H
50-59 years, male
3.3
GTEX-ZDYS-1226-SM-5IJF3
50-59 years, male
3.3
GTEX-12C56-1326-SM-5FQSV
20-29 years, male
3.2
GTEX-ZVP2-0826-SM-59HJ6
50-59 years, male
3.2
GTEX-117YX-1526-SM-5H12T
50-59 years, male
3.1
GTEX-REY6-2126-SM-48FD9
60-69 years, male
3.1
GTEX-Y9LG-1826-SM-4VBQC
30-39 years, male
3.1
GTEX-S33H-1826-SM-4AD65
30-39 years, male
3.0
GTEX-SJXC-2026-SM-4DM6N
60-69 years, male
3.0
GTEX-XOTO-2826-SM-4B65I
50-59 years, male
3.0
GTEX-YJ8A-1126-SM-5IFJU
20-29 years, male
3.0
GTEX-11TUW-2126-SM-5GU7B
60-69 years, male
2.8
GTEX-NFK9-2226-SM-3MJGP
40-49 years, male
2.7
GTEX-145LT-0626-SM-5O99E
40-49 years, male
2.2
GTEX-11WQK-2726-SM-5EQMU
50-59 years, male
2.1
GTEX-U8XE-2526-SM-4E3IT
30-39 years, male
2.1
GTEX-144GM-0826-SM-5O98R
20-29 years, male
1.8
Show all
PROSTATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.