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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 38.7
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 114
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 29.1
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 118.3
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 37.9
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 107.5
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 290.8
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 171.3
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 627.8
Min RPKM: 1.9
Std RPKM: 118.7
Median RPKM: 82.6
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
627.8
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
577.6
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
489.3
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
406.4
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
386.2
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
377.5
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
361.6
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
343.3
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
314.0
GTEX-RU72-1426-SM-46MUF
50-59 years, female
289.4
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
284.5
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
282.4
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
279.1
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
267.4
GTEX-R53T-0326-SM-48FEC
50-59 years, female
266.8
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
223.6
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
221.9
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
217.8
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
208.0
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
206.9
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
194.6
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
189.8
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
189.0
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
186.9
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
186.8
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
186.8
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
183.6
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
170.4
GTEX-REY6-1226-SM-48FDR
60-69 years, male
165.1
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
158.9
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
153.5
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
149.7
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
148.0
GTEX-QESD-2026-SM-447BI
20-29 years, male
147.9
GTEX-YECK-1926-SM-4W21H
60-69 years, male
147.4
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
147.1
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
146.5
GTEX-S33H-1626-SM-4AD68
30-39 years, male
145.5
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
142.7
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
140.7
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
128.5
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
121.4
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
119.9
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
117.9
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
115.3
GTEX-13113-1326-SM-5GCOI
60-69 years, female
110.3
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
109.8
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
108.5
GTEX-11ZUS-2526-SM-59872
30-39 years, male
107.8
GTEX-RN64-1826-SM-48FDV
50-59 years, male
107.0
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
106.5
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
105.3
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
104.2
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
103.8
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
103.5
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
98.0
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
85.0
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
84.0
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
83.4
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
82.6
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
81.7
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
78.5
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
77.8
GTEX-Q734-0326-SM-48U15
40-49 years, female
75.1
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
70.2
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
65.4
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
65.0
GTEX-1399T-0826-SM-5IFES
60-69 years, male
62.9
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
62.4
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
62.2
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
59.2
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
57.8
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
56.9
GTEX-12696-0826-SM-5EGGE
60-69 years, male
52.8
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
48.9
GTEX-13112-1426-SM-5EGH8
50-59 years, male
47.5
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
47.5
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
47.3
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
46.6
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
46.1
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
45.2
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
43.0
GTEX-P78B-1326-SM-3P611
40-49 years, female
42.2
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
39.2
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
37.8
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
37.5
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
36.4
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
36.2
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
33.6
GTEX-S32W-1926-SM-4AD63
50-59 years, female
32.4
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
32.2
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
32.1
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
25.9
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
25.9
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
24.8
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
23.3
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
23.3
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
21.1
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
20.3
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
18.4
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
18.3
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
17.0
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
16.7
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
15.3
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
14.4
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
14.2
GTEX-X261-1726-SM-4PQYT
50-59 years, male
13.6
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
11.9
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
11.4
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
10.9
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
9.9
GTEX-11GSP-0626-SM-5986T
60-69 years, female
9.8
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
8.8
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
6.4
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
6.2
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
6.0
GTEX-QEL4-1226-SM-447A4
50-59 years, male
4.7
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
2.0
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
1.9
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.