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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1402.0
Min RPKM: 495.3
Std RPKM: 220.7
Median RPKM: 801.0
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
1402.0
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
1385.6
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
1373.0
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
1320.1
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
1318.3
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
1299.9
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
1285.6
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
1277.9
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
1274.7
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
1274.0
GTEX-RU72-2226-SM-46MUE
50-59 years, female
1246.9
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
1239.7
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
1198.0
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
1188.4
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
1126.8
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
1095.2
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
1087.3
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
1077.8
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
1062.2
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
1049.4
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
1047.1
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
1008.0
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
985.9
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
984.8
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
971.4
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
954.8
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
935.6
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
922.2
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
921.1
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
918.1
GTEX-P78B-1926-SM-3P616
40-49 years, female
916.5
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
914.7
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
911.6
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
909.0
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
903.6
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
891.1
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
870.4
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
865.0
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
865.0
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
859.3
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
858.0
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
853.4
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
845.2
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
829.0
GTEX-11I78-1926-SM-59878
50-59 years, female
825.8
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
821.8
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
818.6
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
806.2
GTEX-S341-0726-SM-4AD5R
40-49 years, female
801.0
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
796.0
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
792.0
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
791.7
GTEX-S32W-1226-SM-4AD67
50-59 years, female
781.0
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
777.2
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
769.3
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
762.0
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
760.8
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
760.7
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
760.6
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
760.0
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
759.8
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
757.4
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
756.2
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
751.0
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
747.6
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
738.8
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
735.2
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
732.6
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
732.0
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
728.1
GTEX-QCQG-1426-SM-48U22
50-59 years, female
724.2
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
714.7
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
713.4
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
713.1
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
709.1
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
701.4
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
699.2
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
697.3
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
688.5
GTEX-Q734-0726-SM-48TZP
40-49 years, female
680.0
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
676.2
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
675.2
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
674.3
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
672.0
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
659.1
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
639.7
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
636.3
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
628.5
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
622.5
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
607.6
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
591.1
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
578.0
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
570.3
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
547.4
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
541.4
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
504.1
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
495.3
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.