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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 1680
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 1235.2
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 2312.2
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1218.3
Min RPKM: 168.9
Std RPKM: 168.0
Median RPKM: 378.1
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
1218.3
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
1020.2
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
886.0
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
836.2
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
816.9
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
802.1
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
789.3
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
778.9
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
761.5
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
722.5
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
719.9
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
707.0
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
705.5
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
698.4
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
679.1
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
675.6
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
672.4
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
656.0
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
652.4
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
651.4
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
650.6
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
643.8
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
635.5
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
625.9
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
625.8
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
619.3
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
619.2
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
617.0
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
607.8
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
606.7
GTEX-RU72-0626-SM-46MUI
50-59 years, female
604.8
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
596.7
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
578.1
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
567.4
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
555.5
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
552.1
GTEX-13113-1726-SM-5GCOO
60-69 years, female
552.1
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
546.2
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
543.6
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
541.0
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
534.5
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
531.2
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
530.1
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
525.8
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
524.9
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
524.4
GTEX-S341-1526-SM-4AD6K
40-49 years, female
524.2
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
524.1
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
522.8
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
522.6
GTEX-11P81-1926-SM-5BC53
30-39 years, female
515.3
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
513.9
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
511.4
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
511.4
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
510.4
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
510.1
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
510.0
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
507.9
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
507.1
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
506.7
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
506.3
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
490.7
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
490.1
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
488.8
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
488.0
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
487.8
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
487.5
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
479.2
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
476.8
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
476.8
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
471.7
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
471.5
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
469.2
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
465.5
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
457.5
GTEX-1192X-2326-SM-5987X
50-59 years, male
454.2
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
454.0
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
453.7
GTEX-QEL4-2126-SM-447AE
50-59 years, male
452.3
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
452.2
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
444.8
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
439.7
GTEX-TML8-1226-SM-32QON
40-49 years, female
432.5
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
431.9
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
422.1
GTEX-QVJO-1826-SM-447C9
60-69 years, female
421.8
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
420.3
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
419.8
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
416.7
GTEX-1122O-1226-SM-5H113
60-69 years, female
415.9
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
415.6
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
415.2
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
413.5
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
413.2
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
412.2
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
408.9
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
406.7
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
405.7
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
402.7
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
397.3
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
396.9
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
395.5
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
394.3
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
394.2
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
393.5
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
393.1
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
379.6
GTEX-14753-2426-SM-5LU8U
60-69 years, male
376.6
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
375.7
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
373.0
GTEX-11EI6-0626-SM-5985T
60-69 years, male
371.0
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
366.2
GTEX-111YS-1926-SM-5GICC
60-69 years, male
365.9
GTEX-X261-0626-SM-3NMD9
50-59 years, male
364.3
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
359.7
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
356.8
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
348.4
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
346.5
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
346.5
GTEX-XBED-1626-SM-47JYN
60-69 years, male
345.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
345.0
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
344.2
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
342.2
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
339.6
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
337.4
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
335.3
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
334.9
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
334.8
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
333.7
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
330.8
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
330.6
GTEX-11OF3-1926-SM-59889
60-69 years, male
327.0
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
323.4
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
320.8
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
320.4
GTEX-R53T-1526-SM-48FEK
50-59 years, female
319.1
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
317.9
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
317.3
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
316.7
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
315.9
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
312.7
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
312.3
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
309.6
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
309.5
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
308.8
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
306.5
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
303.8
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
302.9
GTEX-117YX-1426-SM-5H12H
50-59 years, male
302.3
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
300.0
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
299.0
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
298.1
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
297.9
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
297.7
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
293.5
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
292.5
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
291.9
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
291.8
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
291.4
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
290.7
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
290.0
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
289.4
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
287.2
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
284.2
GTEX-T6MN-0726-SM-32PML
50-59 years, male
284.0
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
283.1
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
278.6
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
277.9
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
276.8
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
276.1
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
273.7
GTEX-WFON-1826-SM-3GILG
40-49 years, male
272.5
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
268.8
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
268.4
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
268.4
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
267.3
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
266.0
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
266.0
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
262.1
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
261.5
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
256.1
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
255.4
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
254.6
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
249.3
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
243.3
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
242.9
GTEX-11P82-1326-SM-5HL62
20-29 years, male
239.7
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
239.3
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
236.3
GTEX-117XS-1926-SM-5GICO
60-69 years, male
233.4
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
231.0
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
228.7
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
228.1
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
226.4
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
224.5
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
223.8
GTEX-144GM-0926-SM-5O994
20-29 years, male
220.7
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
220.2
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
219.7
GTEX-REY6-2426-SM-48FF5
60-69 years, male
218.8
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
218.3
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
217.5
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
217.1
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
211.2
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
206.7
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
206.7
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
206.5
GTEX-R55D-0826-SM-48FEA
50-59 years, male
198.9
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
197.5
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
195.2
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
189.0
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
177.4
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
174.3
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
168.9
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.