We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 544.5
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 781.3
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 269.9
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 798.3
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 858
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 513.4
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 193.3
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 474.2
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 387
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 710.2
Min RPKM: 116.8
Std RPKM: 129.2
Median RPKM: 412.4
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
710.2
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
687.9
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
661.4
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
651.6
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
650.9
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
643.2
GTEX-REY6-0126-SM-48FDT
60-69 years, male
642.6
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
642.6
GTEX-13112-0226-SM-5P9IV
50-59 years, male
641.4
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
636.7
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
628.8
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
626.7
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
623.8
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
620.7
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
610.1
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
606.0
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
603.1
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
598.3
GTEX-Y111-2426-SM-4TT23
50-59 years, male
596.5
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
596.4
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
590.6
GTEX-QLQW-1026-SM-447A9
30-39 years, male
564.8
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
564.0
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
560.7
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
559.2
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
559.0
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
558.7
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
556.3
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
554.3
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
546.8
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
541.3
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
534.4
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
534.4
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
525.4
GTEX-S95S-1126-SM-4B64E
60-69 years, male
522.7
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
519.7
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
519.6
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
515.9
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
515.0
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
512.8
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
512.7
GTEX-11OF3-1826-SM-5987N
60-69 years, male
512.3
GTEX-11DXZ-2126-SM-59881
50-59 years, male
510.0
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
508.5
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
508.3
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
507.2
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
506.1
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
503.9
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
502.8
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
500.1
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
497.1
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
493.1
GTEX-117XS-2026-SM-5GID1
60-69 years, male
490.7
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
490.2
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
488.9
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
488.0
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
487.7
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
487.4
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
486.6
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
485.0
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
483.0
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
481.7
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
479.2
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
478.7
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
478.0
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
476.3
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
473.0
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
469.3
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
466.3
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
465.3
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
462.4
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
462.3
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
461.1
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
460.6
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
452.8
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
447.2
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
442.9
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
435.2
GTEX-R55C-1426-SM-48FED
40-49 years, male
431.6
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
429.6
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
424.1
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
417.6
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
416.6
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
415.5
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
415.5
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
413.3
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
411.5
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
410.2
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
409.2
GTEX-V955-1926-SM-4KL1L
60-69 years, male
408.3
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
407.1
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
406.2
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
404.5
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
404.0
GTEX-13111-1526-SM-5EGJX
50-59 years, male
402.6
GTEX-12696-0226-SM-5EGL3
60-69 years, male
401.2
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
401.1
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
399.8
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
398.6
GTEX-XPT6-1626-SM-4B655
20-29 years, male
397.4
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
395.5
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
395.2
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
395.0
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
393.0
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
392.7
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
392.4
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
391.3
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
390.4
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
388.6
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
388.2
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
384.8
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
384.6
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
377.9
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
376.3
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
375.5
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
370.1
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
369.1
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
367.8
GTEX-S33H-0126-SM-4AD62
30-39 years, male
360.5
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
359.9
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
359.0
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
355.2
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
354.6
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
350.3
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
342.6
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
341.4
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
341.3
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
339.1
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
337.6
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
331.6
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
325.4
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
317.5
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
316.5
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
315.8
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
312.2
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
311.5
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
309.5
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
303.8
GTEX-RN64-2326-SM-48FDW
50-59 years, male
300.1
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
291.6
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
291.4
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
290.4
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
281.8
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
281.6
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
278.8
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
276.1
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
274.3
GTEX-R55D-0126-SM-48FEL
50-59 years, male
270.8
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
270.5
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
267.9
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
261.3
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
260.5
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
258.6
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
253.5
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
252.7
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
251.8
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
245.3
GTEX-X261-2326-SM-4PQYU
50-59 years, male
242.4
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
238.1
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
237.1
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
226.5
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
225.0
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
213.6
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
189.6
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
189.0
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
180.2
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
155.5
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
151.4
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
140.3
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
130.7
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
125.4
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
116.8
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.