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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 3239.4
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 2365.5
Min RPKM: 41.8
Std RPKM: 326.1
Median RPKM: 158.7
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
2365.5
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
1434.7
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
1186.4
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
1077.8
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
1060.1
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
922.3
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
862.9
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
793.9
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
694.7
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
687.7
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
676.8
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
643.8
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
635.0
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
588.3
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
567.3
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
550.9
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
505.0
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
443.0
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
440.2
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
436.6
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
429.6
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
417.1
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
412.3
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
412.2
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
404.6
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
384.2
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
382.7
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
375.5
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
371.7
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
342.7
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
334.9
GTEX-X585-3026-SM-46MWF
50-59 years, male
331.4
GTEX-WL46-2926-SM-3LK82
50-59 years, male
326.7
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
303.2
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
286.8
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
272.7
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
271.7
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
264.6
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
252.5
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
242.8
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
235.2
GTEX-145MF-2726-SM-5O995
50-59 years, male
231.1
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
229.4
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
225.8
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
222.0
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
211.9
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
210.0
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
204.0
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
191.3
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
182.0
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
179.0
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
175.7
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
172.3
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
170.4
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
164.8
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
163.7
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
162.1
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
155.3
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
154.7
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
146.3
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
141.0
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
138.6
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
135.9
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
135.0
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
135.0
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
133.7
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
132.1
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
129.8
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
128.3
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
126.5
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
122.0
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
121.6
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
120.2
GTEX-11GSP-3226-SM-5986O
60-69 years, female
119.4
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
114.7
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
109.3
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
108.7
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
106.2
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
105.4
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
102.8
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
100.7
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
96.9
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
95.8
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
95.5
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
95.4
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
93.9
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
93.3
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
92.3
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
91.7
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
90.7
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
90.6
GTEX-1128S-2726-SM-5H12C
60-69 years, female
90.2
GTEX-11PRG-2926-SM-5987A
50-59 years, male
88.4
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
84.8
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
84.5
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
83.3
GTEX-144FL-3026-SM-5O99C
50-59 years, male
82.3
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
80.7
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
79.8
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
79.0
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
77.3
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
77.2
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
74.5
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
69.9
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
69.8
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
61.3
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
56.4
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
55.3
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
55.2
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
53.3
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
50.7
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
49.0
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
45.6
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
41.8
Show all
Brain - Frontal Cortex (BA9) RPKM: 306.3
Samples: 108
Max RPKM: 4782.3
Min RPKM: 40.4
Std RPKM: 552.6
Median RPKM: 162.5
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
4782.3
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
2469.8
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
2025.4
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
1425.0
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
954.9
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
890.8
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
783.3
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
672.0
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
634.9
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
620.7
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
618.3
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
554.3
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
536.4
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
440.9
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
437.0
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
386.5
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
366.5
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
365.2
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
342.3
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
326.4
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
321.3
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
315.5
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
313.9
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
295.6
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
274.0
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
271.8
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
267.2
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
254.3
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
254.1
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
252.9
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
252.6
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
238.8
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
235.9
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
231.3
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
225.0
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
224.8
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
222.0
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
220.7
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
216.8
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
202.2
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
197.4
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
196.6
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
191.1
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
190.9
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
190.1
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
185.5
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
182.2
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
179.5
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
178.3
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
173.6
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
172.6
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
169.2
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
168.0
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
164.9
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
160.0
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
159.7
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
157.4
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
157.2
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
157.1
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
141.1
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
139.8
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
139.4
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
139.3
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
138.0
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
137.9
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
137.1
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
137.0
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
133.9
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
132.1
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
128.4
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
125.5
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
125.3
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
123.7
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
118.0
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
117.4
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
115.3
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
114.3
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
112.2
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
106.6
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
103.6
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
103.0
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
102.9
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
102.2
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
102.0
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
96.9
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
94.6
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
94.3
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
93.4
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
92.0
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
91.2
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
89.6
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
89.6
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
88.9
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
87.3
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
86.9
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
86.7
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
83.2
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
81.7
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
81.3
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
80.3
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
79.6
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
76.8
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
75.2
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
73.2
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
68.5
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
59.4
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
54.7
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
40.4
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.