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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1229.6
Min RPKM: 45.6
Std RPKM: 204.0
Median RPKM: 217.1
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
1229.6
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
1003.5
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
955.6
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
941.7
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
837.0
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
684.7
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
625.0
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
602.5
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
597.7
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
580.7
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
566.5
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
545.7
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
508.8
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
494.8
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
487.2
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
455.1
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
440.1
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
438.6
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
430.9
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
420.9
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
400.7
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
395.1
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
387.1
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
378.3
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
376.5
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
355.7
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
347.2
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
334.9
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
328.0
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
314.0
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
301.5
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
300.0
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
299.4
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
298.9
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
294.5
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
290.1
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
289.1
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
284.7
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
276.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
270.5
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
268.4
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
261.8
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
259.7
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
257.7
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
253.7
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
251.2
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
244.5
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
244.3
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
241.3
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
240.4
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
231.0
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
230.9
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
230.7
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
228.0
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
227.8
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
227.5
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
227.1
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
226.3
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
217.1
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
217.0
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
215.7
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
210.2
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
210.1
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
206.4
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
204.9
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
200.4
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
199.3
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
196.3
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
192.1
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
189.9
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
189.5
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
187.1
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
185.4
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
185.3
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
183.6
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
182.5
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
180.9
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
178.6
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
176.8
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
175.4
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
173.5
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
170.2
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
159.1
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
155.6
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
153.5
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
153.2
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
152.7
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
151.1
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
150.9
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
142.3
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
141.1
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
139.3
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
133.1
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
131.4
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
128.8
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
126.7
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
125.5
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
124.2
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
122.9
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
120.6
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
113.6
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
111.4
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
110.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
110.1
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
106.8
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
104.5
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
102.4
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
102.3
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
99.0
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
98.3
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
97.7
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
95.5
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
81.3
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
77.6
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
71.7
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
71.4
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
45.6
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.