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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 353.8
Min RPKM: 116.8
Std RPKM: 43.3
Median RPKM: 203.4
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
353.8
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
309.3
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
288.0
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
281.1
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
280.0
GTEX-R55G-0226-SM-48FEI
40-49 years, female
277.1
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
269.3
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
269.2
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
268.7
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
268.2
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
268.1
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
268.0
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
265.0
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
264.6
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
263.4
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
263.0
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
262.2
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
259.9
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
252.5
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
252.4
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
249.7
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
249.4
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
246.5
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
246.2
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
242.8
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
241.2
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
240.8
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
237.1
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
235.9
GTEX-QCQG-0226-SM-48U28
50-59 years, female
235.7
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
232.8
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
232.5
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
230.0
GTEX-QV31-0126-SM-447BP
30-39 years, male
228.1
GTEX-144GN-2126-SM-5O99D
50-59 years, male
226.9
GTEX-X585-1826-SM-4QAS3
50-59 years, male
226.8
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
226.5
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
224.3
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
221.3
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
219.8
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
219.3
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
214.3
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
214.1
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
212.6
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
211.5
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
211.4
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
211.0
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
210.9
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
210.7
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
208.1
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
207.7
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
203.7
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
203.1
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
202.0
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
202.0
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
201.3
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
200.8
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
199.3
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
198.6
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
198.3
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
197.7
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
197.5
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
195.8
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
193.8
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
192.7
GTEX-QLQW-0126-SM-447BK
30-39 years, male
192.7
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
192.0
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
191.1
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
190.9
GTEX-13111-0126-SM-5EGHO
50-59 years, male
190.1
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
189.2
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
189.2
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
188.3
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
187.9
GTEX-PX3G-0926-SM-48U12
20-29 years, female
182.1
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
179.0
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
177.6
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
175.1
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
174.9
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
173.6
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
172.2
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
172.2
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
170.8
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
169.3
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
167.2
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
166.4
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
166.3
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
166.1
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
166.0
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
164.9
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
164.1
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
162.2
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
161.3
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
157.3
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
155.7
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
152.9
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
152.1
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
150.7
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
148.4
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
141.1
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
137.5
GTEX-Q734-0226-SM-48U1A
40-49 years, female
128.1
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
118.6
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
116.8
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.