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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 768.0
Min RPKM: 248.6
Std RPKM: 104.1
Median RPKM: 399.8
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
768.0
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
688.7
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
660.1
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
652.4
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
614.7
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
612.7
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
612.2
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
600.8
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
593.1
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
575.8
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
571.5
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
550.4
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
548.5
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
536.2
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
531.1
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
526.4
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
514.9
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
507.8
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
506.4
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
505.0
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
494.9
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
491.2
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
487.0
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
477.7
GTEX-RU72-2226-SM-46MUE
50-59 years, female
476.9
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
472.1
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
468.4
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
464.0
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
462.9
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
460.3
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
457.7
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
456.6
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
454.8
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
452.2
GTEX-S32W-1226-SM-4AD67
50-59 years, female
447.9
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
425.9
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
424.7
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
424.3
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
419.0
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
415.7
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
411.5
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
410.1
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
409.5
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
408.9
GTEX-P78B-1926-SM-3P616
40-49 years, female
407.2
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
405.2
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
404.1
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
403.4
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
399.8
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
397.4
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
397.1
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
395.5
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
395.1
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
389.8
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
388.1
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
387.4
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
385.4
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
383.5
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
381.8
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
381.2
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
374.8
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
373.8
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
373.0
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
371.4
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
367.6
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
367.1
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
364.8
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
360.3
GTEX-11I78-1926-SM-59878
50-59 years, female
355.6
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
353.1
GTEX-QCQG-1426-SM-48U22
50-59 years, female
351.7
GTEX-S341-0726-SM-4AD5R
40-49 years, female
350.0
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
347.8
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
343.3
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
340.1
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
337.0
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
335.1
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
334.6
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
332.1
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
330.7
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
330.3
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
328.1
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
326.4
GTEX-Q734-0726-SM-48TZP
40-49 years, female
324.6
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
309.9
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
306.7
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
302.1
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
298.0
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
288.8
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
287.2
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
281.6
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
279.9
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
279.8
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
277.1
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
272.6
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
259.0
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
248.6
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.