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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 34.7
Min RPKM: 7.0
Std RPKM: 4.3
Median RPKM: 12.1
GTEX-1117F-3026-SM-5GZYU
60-69 years, female
34.7
GTEX-13JVG-2926-SM-5J2N9
60-69 years, male
23.8
GTEX-13OVI-2326-SM-5KM47
60-69 years, female
22.5
GTEX-WOFM-2126-SM-4OOSR
20-29 years, male
20.4
GTEX-13QJC-2326-SM-5Q5CD
60-69 years, female
17.4
GTEX-Y111-2626-SM-4TT24
50-59 years, male
15.7
GTEX-13NYC-2626-SM-5K7VN
60-69 years, male
15.4
GTEX-ZE7O-2926-SM-51MSG
50-59 years, female
15.0
GTEX-X5EB-1726-SM-4E3J7
40-49 years, male
14.8
GTEX-13CF2-2426-SM-5LZYL
60-69 years, male
14.2
GTEX-145ME-1626-SM-5RQI3
40-49 years, female
14.2
GTEX-11NV4-1926-SM-5N9D4
60-69 years, male
13.8
GTEX-13111-2326-SM-5LZUQ
50-59 years, male
13.7
GTEX-13G51-2426-SM-5LZY8
60-69 years, male
13.7
GTEX-XGQ4-2626-SM-4AT6B
50-59 years, male
13.5
GTEX-13113-1526-SM-5EGHV
60-69 years, female
13.4
GTEX-1314G-2026-SM-5LZUM
30-39 years, male
13.4
GTEX-X15G-2126-SM-4PQZR
50-59 years, female
13.4
GTEX-X261-2426-SM-4PQZU
50-59 years, male
13.4
GTEX-Y5V6-2226-SM-4VDTC
60-69 years, male
13.4
GTEX-XMK1-2626-SM-4B65R
40-49 years, male
13.1
GTEX-ZA64-1726-SM-5CVMF
20-29 years, male
13.1
GTEX-131XF-2826-SM-5EGKH
60-69 years, male
13.0
GTEX-13O21-1926-SM-5MR39
50-59 years, male
12.9
GTEX-13NYB-2426-SM-5IFF4
40-49 years, male
12.6
GTEX-111FC-2926-SM-5GZY7
60-69 years, male
12.4
GTEX-YB5K-1726-SM-5IFIZ
40-49 years, female
12.3
GTEX-ZXG5-2826-SM-5NQ8T
60-69 years, male
12.2
GTEX-Y5LM-1826-SM-4VDT9
40-49 years, female
12.1
GTEX-1445S-2926-SM-5O993
60-69 years, male
11.9
GTEX-11EQ9-2026-SM-5P9JI
30-39 years, male
11.8
GTEX-WFJO-2026-SM-4LVM3
30-39 years, male
11.6
GTEX-11TUW-2426-SM-5EQKB
60-69 years, male
11.3
GTEX-12WSN-2226-SM-5DUXT
40-49 years, male
11.3
GTEX-1339X-2326-SM-5HL5B
40-49 years, male
11.3
GTEX-ZC5H-2726-SM-5KLZW
40-49 years, female
11.1
GTEX-11ZTS-3026-SM-5EQM7
60-69 years, female
11.0
GTEX-Y3I4-1926-SM-4TT8L
50-59 years, male
11.0
GTEX-12WSL-2126-SM-5GCNG
50-59 years, male
10.8
GTEX-146FR-1226-SM-5SIA7
60-69 years, female
10.7
GTEX-11P82-0926-SM-5986X
20-29 years, male
10.6
GTEX-11ZTT-2226-SM-5CVLP
60-69 years, female
10.5
GTEX-X3Y1-1926-SM-4PQZO
40-49 years, male
10.3
GTEX-13OVL-2926-SM-5IFG3
50-59 years, male
10.2
GTEX-11P81-2026-SM-5P9GT
30-39 years, female
10.1
GTEX-ZPU1-2326-SM-57WEP
40-49 years, male
9.6
GTEX-11WQK-2926-SM-5EQKT
50-59 years, male
9.5
GTEX-13VXT-1726-SM-5IFF5
20-29 years, female
9.4
GTEX-ZP4G-1926-SM-57WDZ
20-29 years, female
9.3
GTEX-YF7O-2226-SM-5CVN8
50-59 years, male
8.9
GTEX-ZQUD-2126-SM-51MSY
30-39 years, male
8.9
GTEX-WYVS-2026-SM-4RGNS
40-49 years, female
8.8
GTEX-XV7Q-2426-SM-4BRV8
40-49 years, female
8.8
GTEX-12WSM-1826-SM-5BC64
60-69 years, male
8.5
GTEX-ZT9W-2126-SM-51MSF
50-59 years, male
8.5
GTEX-14B4R-1426-SM-5Q5CG
30-39 years, male
7.6
GTEX-ZQG8-2126-SM-4YCF1
60-69 years, female
7.0
Show all
SALIVARY GLAND - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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