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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 58.0
Min RPKM: 19.3
Std RPKM: 6.7
Median RPKM: 36.6
GTEX-13JVG-2926-SM-5J2N9
60-69 years, male
58.0
GTEX-Y5V6-2226-SM-4VDTC
60-69 years, male
49.9
GTEX-X261-2426-SM-4PQZU
50-59 years, male
48.7
GTEX-13G51-2426-SM-5LZY8
60-69 years, male
46.2
GTEX-WOFM-2126-SM-4OOSR
20-29 years, male
45.6
GTEX-X15G-2126-SM-4PQZR
50-59 years, female
45.1
GTEX-XMK1-2626-SM-4B65R
40-49 years, male
44.8
GTEX-Y111-2626-SM-4TT24
50-59 years, male
44.5
GTEX-1314G-2026-SM-5LZUM
30-39 years, male
43.5
GTEX-11NV4-1926-SM-5N9D4
60-69 years, male
43.0
GTEX-13O21-1926-SM-5MR39
50-59 years, male
42.9
GTEX-13113-1526-SM-5EGHV
60-69 years, female
42.8
GTEX-ZA64-1726-SM-5CVMF
20-29 years, male
42.8
GTEX-11P81-2026-SM-5P9GT
30-39 years, female
41.8
GTEX-11P82-0926-SM-5986X
20-29 years, male
41.8
GTEX-Y3I4-1926-SM-4TT8L
50-59 years, male
41.3
GTEX-13111-2326-SM-5LZUQ
50-59 years, male
41.2
GTEX-X5EB-1726-SM-4E3J7
40-49 years, male
40.9
GTEX-13NYB-2426-SM-5IFF4
40-49 years, male
40.8
GTEX-111FC-2926-SM-5GZY7
60-69 years, male
39.1
GTEX-XGQ4-2626-SM-4AT6B
50-59 years, male
38.4
GTEX-ZE7O-2926-SM-51MSG
50-59 years, female
38.4
GTEX-ZP4G-1926-SM-57WDZ
20-29 years, female
38.2
GTEX-12WSL-2126-SM-5GCNG
50-59 years, male
37.6
GTEX-ZXG5-2826-SM-5NQ8T
60-69 years, male
37.1
GTEX-YF7O-2226-SM-5CVN8
50-59 years, male
36.9
GTEX-131XF-2826-SM-5EGKH
60-69 years, male
36.8
GTEX-11EQ9-2026-SM-5P9JI
30-39 years, male
36.7
GTEX-145ME-1626-SM-5RQI3
40-49 years, female
36.6
GTEX-13OVI-2326-SM-5KM47
60-69 years, female
36.1
GTEX-ZC5H-2726-SM-5KLZW
40-49 years, female
36.1
GTEX-12WSN-2226-SM-5DUXT
40-49 years, male
35.8
GTEX-1117F-3026-SM-5GZYU
60-69 years, female
35.5
GTEX-146FR-1226-SM-5SIA7
60-69 years, female
35.3
GTEX-1339X-2326-SM-5HL5B
40-49 years, male
34.8
GTEX-13OVL-2926-SM-5IFG3
50-59 years, male
34.8
GTEX-1445S-2926-SM-5O993
60-69 years, male
34.8
GTEX-14B4R-1426-SM-5Q5CG
30-39 years, male
34.6
GTEX-YB5K-1726-SM-5IFIZ
40-49 years, female
34.3
GTEX-ZQUD-2126-SM-51MSY
30-39 years, male
34.1
GTEX-13CF2-2426-SM-5LZYL
60-69 years, male
33.8
GTEX-X3Y1-1926-SM-4PQZO
40-49 years, male
33.7
GTEX-13QJC-2326-SM-5Q5CD
60-69 years, female
33.3
GTEX-WFJO-2026-SM-4LVM3
30-39 years, male
33.3
GTEX-13VXT-1726-SM-5IFF5
20-29 years, female
32.8
GTEX-13NYC-2626-SM-5K7VN
60-69 years, male
31.8
GTEX-XV7Q-2426-SM-4BRV8
40-49 years, female
31.2
GTEX-ZQG8-2126-SM-4YCF1
60-69 years, female
31.1
GTEX-ZT9W-2126-SM-51MSF
50-59 years, male
29.8
GTEX-12WSM-1826-SM-5BC64
60-69 years, male
29.6
GTEX-ZPU1-2326-SM-57WEP
40-49 years, male
28.7
GTEX-11ZTT-2226-SM-5CVLP
60-69 years, female
28.5
GTEX-Y5LM-1826-SM-4VDT9
40-49 years, female
28.2
GTEX-WYVS-2026-SM-4RGNS
40-49 years, female
27.8
GTEX-11TUW-2426-SM-5EQKB
60-69 years, male
27.4
GTEX-11ZTS-3026-SM-5EQM7
60-69 years, female
24.3
GTEX-11WQK-2926-SM-5EQKT
50-59 years, male
19.3
Show all
SALIVARY GLAND - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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