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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1189.6
Min RPKM: 50.3
Std RPKM: 260.7
Median RPKM: 415.1
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
1189.6
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
1072.1
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
1039.3
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
962.5
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
935.7
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
919.8
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
875.6
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
874.5
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
851.9
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
847.4
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
779.5
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
770.7
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
757.4
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
727.0
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
721.1
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
709.4
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
692.6
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
672.1
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
669.1
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
659.7
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
650.8
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
648.2
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
637.1
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
623.7
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
609.2
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
597.5
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
581.4
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
578.2
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
577.0
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
570.8
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
567.3
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
563.8
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
555.4
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
554.9
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
546.6
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
546.5
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
532.8
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
511.6
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
487.0
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
480.5
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
473.7
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
469.4
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
456.1
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
455.3
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
433.1
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
420.3
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
417.5
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
416.9
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
413.3
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
409.2
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
395.4
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
388.1
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
384.9
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
382.8
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
377.8
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
374.8
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
368.8
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
356.1
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
352.7
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
347.7
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
340.6
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
335.3
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
334.4
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
329.4
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
325.9
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
290.2
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
286.2
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
283.3
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
267.8
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
261.1
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
251.9
GTEX-QCQG-1226-SM-48U23
50-59 years, female
234.3
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
226.0
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
217.3
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
213.4
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
186.9
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
179.0
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
177.5
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
174.2
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
164.3
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
157.4
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
151.5
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
147.3
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
146.0
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
141.7
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
128.1
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
121.0
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
119.9
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
117.7
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
105.8
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
96.4
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
76.7
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
63.2
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
62.0
GTEX-S341-1226-SM-4AD5S
40-49 years, female
60.4
GTEX-11I78-2026-SM-5987C
50-59 years, female
50.3
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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