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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 3662.2
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 3075.8
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 4938.7
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 536.0
Min RPKM: 71.9
Std RPKM: 56.7
Median RPKM: 178.9
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
536.0
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
383.1
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
353.8
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
343.8
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
339.4
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
333.6
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
326.2
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
322.1
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
313.8
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
299.4
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
296.9
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
293.2
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
292.6
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
279.0
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
277.0
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
276.8
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
274.2
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
273.1
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
270.2
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
269.8
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
267.9
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
249.2
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
247.1
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
237.6
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
237.0
GTEX-QEL4-2126-SM-447AE
50-59 years, male
236.7
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
235.9
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
235.1
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
232.1
GTEX-1192X-2326-SM-5987X
50-59 years, male
231.7
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
231.6
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
231.3
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
228.4
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
227.1
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
226.4
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
224.7
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
224.4
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
221.8
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
221.7
GTEX-13113-1726-SM-5GCOO
60-69 years, female
220.6
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
220.0
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
215.8
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
215.3
GTEX-11P82-1326-SM-5HL62
20-29 years, male
212.0
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
212.0
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
211.6
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
209.2
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
207.1
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
206.2
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
205.4
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
204.6
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
203.9
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
203.8
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
203.5
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
203.4
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
202.2
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
201.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
200.3
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
199.8
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
199.7
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
199.0
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
197.4
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
197.2
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
197.0
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
196.7
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
195.2
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
194.7
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
194.4
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
194.4
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
193.9
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
193.8
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
193.4
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
193.4
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
193.1
GTEX-11P81-1926-SM-5BC53
30-39 years, female
192.8
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
192.8
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
192.8
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
192.2
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
191.9
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
191.4
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
190.0
GTEX-RU72-0626-SM-46MUI
50-59 years, female
189.6
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
189.0
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
189.0
GTEX-S341-1526-SM-4AD6K
40-49 years, female
188.7
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
188.2
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
187.9
GTEX-117YX-1426-SM-5H12H
50-59 years, male
187.5
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
187.4
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
186.7
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
186.0
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
185.8
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
185.0
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
184.8
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
184.6
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
183.5
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
183.1
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
182.8
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
182.5
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
182.3
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
182.2
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
182.1
GTEX-11EI6-0626-SM-5985T
60-69 years, male
181.1
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
180.2
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
180.0
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
179.9
GTEX-QVJO-1826-SM-447C9
60-69 years, female
179.1
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
178.8
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
178.6
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
177.7
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
177.1
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
177.0
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
177.0
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
176.8
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
176.7
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
176.2
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
174.0
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
173.9
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
173.6
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
173.6
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
173.3
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
172.8
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
172.7
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
172.0
GTEX-111YS-1926-SM-5GICC
60-69 years, male
170.5
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
170.2
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
169.5
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
167.7
GTEX-X261-0626-SM-3NMD9
50-59 years, male
167.7
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
167.7
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
167.6
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
167.0
GTEX-1122O-1226-SM-5H113
60-69 years, female
166.6
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
166.6
GTEX-14753-2426-SM-5LU8U
60-69 years, male
166.1
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
165.3
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
164.9
GTEX-XBED-1626-SM-47JYN
60-69 years, male
164.8
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
163.4
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
162.7
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
162.4
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
162.3
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
162.0
GTEX-11OF3-1926-SM-59889
60-69 years, male
161.9
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
161.4
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
159.2
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
158.5
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
158.4
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
158.0
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
157.9
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
156.3
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
155.5
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
155.5
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
154.7
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
154.5
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
153.2
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
152.1
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
151.9
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
151.2
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
150.9
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
150.7
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
150.4
GTEX-REY6-2426-SM-48FF5
60-69 years, male
150.2
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
149.5
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
149.1
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
149.1
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
148.7
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
148.7
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
147.9
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
146.4
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
146.0
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
145.6
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
144.4
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
144.0
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
143.9
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
143.8
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
142.9
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
142.6
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
141.7
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
141.2
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
140.2
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
138.9
GTEX-144GM-0926-SM-5O994
20-29 years, male
137.6
GTEX-R55D-0826-SM-48FEA
50-59 years, male
136.6
GTEX-R53T-1526-SM-48FEK
50-59 years, female
134.8
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
134.7
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
133.2
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
133.1
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
132.4
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
132.4
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
129.6
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
128.8
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
128.7
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
127.1
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
125.4
GTEX-TML8-1226-SM-32QON
40-49 years, female
124.9
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
124.4
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
123.7
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
123.0
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
122.9
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
121.9
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
117.4
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
116.4
GTEX-WFON-1826-SM-3GILG
40-49 years, male
114.1
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
109.6
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
108.6
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
106.6
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
105.8
GTEX-T6MN-0726-SM-32PML
50-59 years, male
103.2
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
102.1
GTEX-117XS-1926-SM-5GICO
60-69 years, male
100.1
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
99.6
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
87.5
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
71.9
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.