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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 849.7
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 794
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 1900
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 734.9
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 718.7
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 808.8
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 650.7
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 962.3
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 589.2
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 556.4
Min RPKM: 138.1
Std RPKM: 67.0
Median RPKM: 249.4
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
556.4
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
436.2
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
431.2
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
411.5
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
396.4
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
389.8
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
389.3
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
377.6
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
377.2
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
356.1
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
355.1
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
352.4
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
351.9
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
350.8
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
349.4
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
347.0
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
344.7
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
342.9
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
335.3
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
333.8
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
328.7
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
325.9
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
324.0
GTEX-S33H-0126-SM-4AD62
30-39 years, male
323.5
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
320.7
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
318.6
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
318.4
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
316.5
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
316.1
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
315.7
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
314.8
GTEX-R55D-0126-SM-48FEL
50-59 years, male
314.4
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
314.0
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
308.0
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
306.2
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
306.0
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
305.4
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
304.8
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
304.2
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
302.3
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
298.0
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
297.9
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
297.4
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
293.3
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
291.9
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
291.7
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
290.2
GTEX-R55C-1426-SM-48FED
40-49 years, male
289.9
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
289.8
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
289.1
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
288.4
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
288.4
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
283.5
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
281.5
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
281.5
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
280.6
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
280.1
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
279.6
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
279.5
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
275.2
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
274.8
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
274.2
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
273.4
GTEX-XPT6-1626-SM-4B655
20-29 years, male
273.4
GTEX-QLQW-1026-SM-447A9
30-39 years, male
269.0
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
268.5
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
267.7
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
266.0
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
265.1
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
264.3
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
264.0
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
263.6
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
262.9
GTEX-RN64-2326-SM-48FDW
50-59 years, male
262.8
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
260.5
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
260.0
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
259.2
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
258.0
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
257.0
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
256.6
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
255.1
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
254.0
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
253.6
GTEX-V955-1926-SM-4KL1L
60-69 years, male
253.2
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
252.8
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
250.8
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
248.0
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
247.2
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
246.4
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
246.2
GTEX-X261-2326-SM-4PQYU
50-59 years, male
246.2
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
245.0
GTEX-S95S-1126-SM-4B64E
60-69 years, male
244.6
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
244.3
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
243.4
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
242.4
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
241.8
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
241.6
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
241.4
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
240.5
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
238.4
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
237.8
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
234.8
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
233.4
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
231.0
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
229.8
GTEX-11DXZ-2126-SM-59881
50-59 years, male
229.4
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
227.5
GTEX-12696-0226-SM-5EGL3
60-69 years, male
224.9
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
224.8
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
221.4
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
219.9
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
219.7
GTEX-11OF3-1826-SM-5987N
60-69 years, male
218.4
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
218.0
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
217.7
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
216.7
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
216.6
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
213.4
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
212.9
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
211.3
GTEX-117XS-2026-SM-5GID1
60-69 years, male
208.5
GTEX-13111-1526-SM-5EGJX
50-59 years, male
207.5
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
205.8
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
204.5
GTEX-REY6-0126-SM-48FDT
60-69 years, male
204.1
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
203.0
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
203.0
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
200.9
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
200.7
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
199.5
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
197.8
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
197.8
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
197.4
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
194.0
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
193.9
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
193.9
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
193.7
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
192.0
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
189.4
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
189.3
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
187.8
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
186.5
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
185.1
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
184.9
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
184.4
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
183.5
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
182.9
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
182.8
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
181.2
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
179.2
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
179.0
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
178.7
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
178.3
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
177.4
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
177.0
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
176.7
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
175.9
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
173.8
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
171.5
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
171.1
GTEX-13112-0226-SM-5P9IV
50-59 years, male
168.2
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
167.6
GTEX-Y111-2426-SM-4TT23
50-59 years, male
163.5
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
163.4
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
158.1
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
147.6
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
144.4
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
144.3
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
143.7
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
143.3
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
138.1
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.