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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1459.1
Min RPKM: 291.0
Std RPKM: 199.2
Median RPKM: 693.7
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
1459.1
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
1375.0
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
1148.9
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
1130.3
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
1107.2
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
1068.3
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
1045.4
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
1026.3
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
989.2
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
951.9
GTEX-13111-0126-SM-5EGHO
50-59 years, male
945.9
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
932.0
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
905.6
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
904.2
GTEX-QV31-0126-SM-447BP
30-39 years, male
900.3
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
886.4
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
874.7
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
866.8
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
863.7
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
863.7
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
855.1
GTEX-QCQG-0226-SM-48U28
50-59 years, female
850.3
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
849.6
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
847.7
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
846.5
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
842.1
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
838.8
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
815.8
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
811.0
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
806.4
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
796.5
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
793.4
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
791.7
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
784.0
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
773.3
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
772.8
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
772.4
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
764.3
GTEX-144GN-2126-SM-5O99D
50-59 years, male
756.8
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
755.7
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
752.4
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
736.7
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
713.2
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
708.6
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
708.1
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
706.2
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
705.6
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
705.0
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
704.6
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
698.4
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
698.2
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
694.4
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
693.1
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
683.9
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
681.8
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
678.7
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
674.3
GTEX-Q734-0226-SM-48U1A
40-49 years, female
674.2
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
673.8
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
673.1
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
668.3
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
667.9
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
666.2
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
661.5
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
657.9
GTEX-PX3G-0926-SM-48U12
20-29 years, female
654.0
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
651.0
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
650.5
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
648.6
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
646.2
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
642.1
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
636.0
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
616.5
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
614.2
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
593.7
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
588.3
GTEX-QLQW-0126-SM-447BK
30-39 years, male
582.6
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
581.2
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
579.5
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
577.7
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
577.0
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
568.6
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
562.4
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
561.0
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
550.4
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
547.3
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
538.4
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
537.7
GTEX-R55G-0226-SM-48FEI
40-49 years, female
531.0
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
525.6
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
519.7
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
496.8
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
489.4
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
470.7
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
462.3
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
459.8
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
458.5
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
441.8
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
431.3
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
409.5
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
372.9
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
360.3
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
359.9
GTEX-X585-1826-SM-4QAS3
50-59 years, male
291.0
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.