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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 2527.7
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 501.2
Min RPKM: 151.6
Std RPKM: 59.6
Median RPKM: 306.1
GTEX-X585-3026-SM-46MWF
50-59 years, male
501.2
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
464.6
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
438.5
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
436.3
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
427.1
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
404.2
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
399.7
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
392.9
GTEX-144FL-3026-SM-5O99C
50-59 years, male
389.9
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
387.6
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
387.3
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
387.1
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
385.2
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
383.4
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
379.9
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
379.0
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
378.8
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
377.8
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
370.2
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
369.0
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
368.5
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
366.0
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
361.2
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
354.1
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
346.9
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
344.7
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
344.7
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
344.6
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
341.2
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
340.2
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
339.3
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
338.2
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
337.9
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
337.1
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
334.6
GTEX-WL46-2926-SM-3LK82
50-59 years, male
332.4
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
330.8
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
329.4
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
329.1
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
328.2
GTEX-145MF-2726-SM-5O995
50-59 years, male
327.7
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
327.6
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
327.1
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
326.9
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
326.7
GTEX-11GSP-3226-SM-5986O
60-69 years, female
325.6
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
325.0
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
324.2
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
323.0
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
321.6
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
317.2
GTEX-11PRG-2926-SM-5987A
50-59 years, male
314.0
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
312.9
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
311.3
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
309.9
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
307.9
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
306.5
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
305.8
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
304.5
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
303.0
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
302.9
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
301.6
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
297.7
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
297.1
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
295.2
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
295.0
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
293.7
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
293.2
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
291.1
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
290.9
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
290.5
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
289.1
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
287.1
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
287.0
GTEX-1128S-2726-SM-5H12C
60-69 years, female
286.1
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
283.8
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
283.1
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
281.2
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
281.0
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
281.0
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
279.5
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
278.4
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
278.4
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
278.4
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
276.1
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
274.3
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
274.0
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
272.9
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
268.4
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
267.7
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
267.0
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
263.6
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
261.9
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
261.5
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
259.7
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
256.0
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
253.7
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
253.4
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
251.7
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
250.5
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
249.6
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
246.5
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
240.3
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
237.2
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
235.7
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
233.5
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
232.6
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
223.2
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
214.5
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
207.2
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
200.8
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
177.5
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
160.0
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
151.6
Show all
Brain - Frontal Cortex (BA9) RPKM: 334.1
Samples: 108
Max RPKM: 575.4
Min RPKM: 119.0
Std RPKM: 86.9
Median RPKM: 337.5
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
575.4
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
561.4
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
541.9
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
498.3
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
475.1
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
459.7
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
450.8
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
447.9
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
445.6
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
440.8
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
436.8
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
434.4
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
434.4
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
424.6
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
424.1
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
422.1
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
420.0
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
418.0
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
414.1
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
413.4
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
411.9
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
407.8
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
405.4
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
399.5
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
399.2
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
397.8
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
397.3
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
391.7
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
388.0
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
387.5
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
386.8
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
385.9
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
384.2
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
381.1
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
375.9
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
366.6
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
365.8
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
363.1
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
361.6
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
358.8
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
357.5
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
355.6
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
355.4
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
353.1
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
352.5
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
350.5
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
349.7
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
347.6
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
346.2
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
345.4
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
344.7
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
341.4
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
339.9
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
337.5
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
337.5
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
335.6
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
335.4
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
331.7
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
326.1
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
324.5
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
323.3
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
322.3
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
320.4
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
317.0
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
316.0
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
314.9
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
314.0
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
313.5
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
310.8
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
308.8
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
302.7
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
302.5
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
300.0
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
297.3
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
292.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
291.0
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
286.0
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
283.7
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
283.2
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
281.1
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
280.8
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
279.0
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
273.5
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
270.2
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
263.6
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
262.1
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
259.3
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
257.4
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
256.8
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
250.3
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
248.7
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
246.8
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
236.8
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
223.9
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
219.7
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
215.6
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
212.8
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
210.4
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
207.9
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
207.9
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
201.9
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
200.5
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
191.4
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
189.9
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
189.1
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
167.1
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
137.4
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
119.0
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.