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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 1036.2
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 654.9
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 851.2
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 810.7
Min RPKM: 182.0
Std RPKM: 78.2
Median RPKM: 358.8
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
810.7
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
659.0
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
563.7
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
546.6
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
546.4
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
523.6
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
520.4
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
518.8
GTEX-XBED-1626-SM-47JYN
60-69 years, male
513.2
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
504.5
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
494.9
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
483.2
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
481.6
GTEX-S341-1526-SM-4AD6K
40-49 years, female
474.0
GTEX-T6MN-0726-SM-32PML
50-59 years, male
468.1
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
466.6
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
465.3
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
463.0
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
462.6
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
462.6
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
461.5
GTEX-1122O-1226-SM-5H113
60-69 years, female
460.4
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
459.9
GTEX-117YX-1426-SM-5H12H
50-59 years, male
459.6
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
458.4
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
457.8
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
457.3
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
450.8
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
450.3
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
449.6
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
448.2
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
445.7
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
439.8
GTEX-WFON-1826-SM-3GILG
40-49 years, male
435.5
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
435.3
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
435.1
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
434.5
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
434.4
GTEX-11OF3-1926-SM-59889
60-69 years, male
434.0
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
433.4
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
425.7
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
425.5
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
425.2
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
424.1
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
423.1
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
420.8
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
420.0
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
419.8
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
418.6
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
417.2
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
416.9
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
413.5
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
413.3
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
413.2
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
412.8
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
410.5
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
410.0
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
409.0
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
407.9
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
407.1
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
405.2
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
401.8
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
401.7
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
401.6
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
401.4
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
399.5
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
398.2
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
397.5
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
395.5
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
395.2
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
393.9
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
389.9
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
388.2
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
387.5
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
387.2
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
387.0
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
386.3
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
385.1
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
384.4
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
383.7
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
378.8
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
378.8
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
378.1
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
378.0
GTEX-11P81-1926-SM-5BC53
30-39 years, female
377.5
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
376.9
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
375.6
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
374.9
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
374.5
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
374.3
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
372.7
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
372.6
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
372.5
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
371.5
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
370.4
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
370.3
GTEX-TML8-1226-SM-32QON
40-49 years, female
369.5
GTEX-11EI6-0626-SM-5985T
60-69 years, male
368.8
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
366.9
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
366.0
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
365.9
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
364.7
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
364.5
GTEX-117XS-1926-SM-5GICO
60-69 years, male
361.8
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
361.3
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
360.9
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
358.9
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
358.7
GTEX-R53T-1526-SM-48FEK
50-59 years, female
356.4
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
354.6
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
353.7
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
352.4
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
351.4
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
350.8
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
350.8
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
350.5
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
350.3
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
349.5
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
349.3
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
348.2
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
347.8
GTEX-13113-1726-SM-5GCOO
60-69 years, female
347.4
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
346.0
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
345.8
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
343.9
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
343.7
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
341.9
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
341.6
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
340.7
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
340.3
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
339.7
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
339.7
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
339.4
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
338.6
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
338.6
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
338.2
GTEX-1192X-2326-SM-5987X
50-59 years, male
337.8
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
336.5
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
335.6
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
334.6
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
333.7
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
333.2
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
332.5
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
331.6
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
330.2
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
330.2
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
327.9
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
327.0
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
326.0
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
325.1
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
324.4
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
322.9
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
320.6
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
319.9
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
319.0
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
318.9
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
318.0
GTEX-R55D-0826-SM-48FEA
50-59 years, male
316.3
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
313.2
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
312.8
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
312.6
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
312.6
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
307.9
GTEX-111YS-1926-SM-5GICC
60-69 years, male
307.3
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
304.0
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
302.3
GTEX-14753-2426-SM-5LU8U
60-69 years, male
301.5
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
299.6
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
298.9
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
298.3
GTEX-QVJO-1826-SM-447C9
60-69 years, female
298.2
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
298.1
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
297.2
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
293.1
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
293.1
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
291.7
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
291.6
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
291.5
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
290.7
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
290.7
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
290.4
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
290.2
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
288.2
GTEX-X261-0626-SM-3NMD9
50-59 years, male
287.9
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
286.8
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
285.9
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
285.6
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
284.8
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
284.5
GTEX-RU72-0626-SM-46MUI
50-59 years, female
284.1
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
283.7
GTEX-REY6-2426-SM-48FF5
60-69 years, male
283.3
GTEX-QEL4-2126-SM-447AE
50-59 years, male
282.5
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
280.7
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
274.5
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
273.2
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
271.9
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
270.9
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
269.8
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
267.6
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
264.4
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
264.0
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
263.6
GTEX-11P82-1326-SM-5HL62
20-29 years, male
262.2
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
258.9
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
257.9
GTEX-144GM-0926-SM-5O994
20-29 years, male
256.1
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
252.7
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
243.1
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
242.0
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
239.1
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
235.4
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
226.2
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
182.0
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.