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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 250.2
Min RPKM: 42.7
Std RPKM: 43.2
Median RPKM: 113.4
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
250.2
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
249.4
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
239.7
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
222.4
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
216.0
GTEX-QLQW-0126-SM-447BK
30-39 years, male
211.0
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
201.8
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
196.4
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
196.3
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
190.0
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
188.1
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
179.1
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
176.0
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
172.7
GTEX-13111-0126-SM-5EGHO
50-59 years, male
172.5
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
169.5
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
166.2
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
162.2
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
160.2
GTEX-QV31-0126-SM-447BP
30-39 years, male
159.3
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
157.5
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
157.3
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
151.6
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
151.4
GTEX-QCQG-0226-SM-48U28
50-59 years, female
149.3
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
148.3
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
148.1
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
144.6
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
139.6
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
135.5
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
134.2
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
132.8
GTEX-PX3G-0926-SM-48U12
20-29 years, female
131.6
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
131.1
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
130.9
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
129.4
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
129.0
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
126.0
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
125.6
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
124.2
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
123.7
GTEX-Q734-0226-SM-48U1A
40-49 years, female
121.4
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
121.3
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
121.3
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
119.9
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
119.3
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
118.1
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
117.7
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
116.8
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
116.3
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
115.8
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
113.7
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
113.1
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
112.9
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
111.7
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
111.7
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
110.5
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
109.9
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
109.0
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
108.8
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
106.7
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
106.3
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
106.1
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
104.7
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
102.9
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
102.0
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
99.8
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
99.4
GTEX-144GN-2126-SM-5O99D
50-59 years, male
99.3
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
98.2
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
97.1
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
95.0
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
94.3
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
93.8
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
93.4
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
93.2
GTEX-R55G-0226-SM-48FEI
40-49 years, female
93.0
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
92.1
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
92.0
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
91.6
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
90.1
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
89.8
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
88.8
GTEX-X585-1826-SM-4QAS3
50-59 years, male
87.6
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
87.6
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
85.2
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
84.9
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
84.4
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
80.9
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
80.7
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
79.6
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
78.8
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
77.9
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
77.8
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
76.0
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
75.3
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
73.6
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
71.8
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
69.0
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
67.9
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
65.0
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
58.0
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
57.8
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
42.7
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.