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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 71.1
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 37.8
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 27.3
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 506.6
Min RPKM: 53.1
Std RPKM: 70.1
Median RPKM: 152.3
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
506.6
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
486.9
GTEX-QVJO-1826-SM-447C9
60-69 years, female
478.8
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
350.0
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
348.1
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
318.2
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
315.5
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
315.3
GTEX-TML8-1226-SM-32QON
40-49 years, female
312.6
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
300.3
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
295.2
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
284.8
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
283.4
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
280.1
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
276.3
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
271.1
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
270.5
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
267.2
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
264.2
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
264.2
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
263.5
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
258.1
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
257.8
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
255.4
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
255.3
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
255.1
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
253.9
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
247.7
GTEX-RU72-0626-SM-46MUI
50-59 years, female
247.7
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
241.8
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
236.1
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
232.5
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
231.4
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
229.7
GTEX-11EI6-0626-SM-5985T
60-69 years, male
229.4
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
227.0
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
226.2
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
222.2
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
222.2
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
220.9
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
216.3
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
215.6
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
215.2
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
214.9
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
213.6
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
213.1
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
211.0
GTEX-13113-1726-SM-5GCOO
60-69 years, female
210.3
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
210.2
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
206.8
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
206.4
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
204.8
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
204.5
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
204.1
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
199.6
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
197.5
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
197.5
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
196.9
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
196.9
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
195.8
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
195.8
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
193.4
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
192.1
GTEX-R53T-1526-SM-48FEK
50-59 years, female
191.3
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
191.3
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
190.3
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
188.7
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
186.8
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
185.4
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
185.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
184.2
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
184.1
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
181.9
GTEX-1122O-1226-SM-5H113
60-69 years, female
180.7
GTEX-XBED-1626-SM-47JYN
60-69 years, male
180.4
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
175.6
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
175.2
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
174.6
GTEX-11OF3-1926-SM-59889
60-69 years, male
172.1
GTEX-S341-1526-SM-4AD6K
40-49 years, female
171.5
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
170.8
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
170.7
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
169.7
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
168.2
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
166.5
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
165.0
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
164.3
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
163.8
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
163.3
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
163.2
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
162.0
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
161.3
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
161.1
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
160.1
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
159.0
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
158.2
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
156.9
GTEX-11P81-1926-SM-5BC53
30-39 years, female
156.6
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
156.1
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
156.0
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
155.3
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
155.3
GTEX-R55D-0826-SM-48FEA
50-59 years, male
154.5
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
153.8
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
153.4
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
152.5
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
152.3
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
152.3
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
151.9
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
151.4
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
150.6
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
150.4
GTEX-REY6-2426-SM-48FF5
60-69 years, male
149.2
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
148.8
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
147.9
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
147.6
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
147.3
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
147.3
GTEX-X261-0626-SM-3NMD9
50-59 years, male
145.1
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
145.0
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
144.7
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
144.3
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
144.2
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
143.9
GTEX-T6MN-0726-SM-32PML
50-59 years, male
143.5
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
142.5
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
142.4
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
142.1
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
141.6
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
141.0
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
140.8
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
140.3
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
138.9
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
137.1
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
136.9
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
136.9
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
136.7
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
136.4
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
134.5
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
134.4
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
134.1
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
134.0
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
133.7
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
132.4
GTEX-WFON-1826-SM-3GILG
40-49 years, male
132.3
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
132.1
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
131.7
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
130.6
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
130.3
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
129.4
GTEX-117YX-1426-SM-5H12H
50-59 years, male
129.3
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
129.3
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
128.0
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
128.0
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
127.8
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
125.3
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
125.1
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
124.1
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
124.0
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
124.0
GTEX-117XS-1926-SM-5GICO
60-69 years, male
123.2
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
123.1
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
123.0
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
122.5
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
121.2
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
120.5
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
119.6
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
119.2
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
118.4
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
116.9
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
115.5
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
115.3
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
115.1
GTEX-144GM-0926-SM-5O994
20-29 years, male
113.3
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
112.8
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
110.3
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
109.7
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
108.7
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
107.8
GTEX-1192X-2326-SM-5987X
50-59 years, male
107.1
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
107.0
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
106.6
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
106.5
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
106.3
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
105.5
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
105.2
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
104.7
GTEX-111YS-1926-SM-5GICC
60-69 years, male
104.5
GTEX-14753-2426-SM-5LU8U
60-69 years, male
102.4
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
101.6
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
101.5
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
101.4
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
100.8
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
100.5
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
99.9
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
99.8
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
97.3
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
95.9
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
93.3
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
93.0
GTEX-11P82-1326-SM-5HL62
20-29 years, male
89.1
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
89.1
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
88.9
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
88.0
GTEX-QEL4-2126-SM-447AE
50-59 years, male
87.7
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
87.2
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
85.4
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
82.3
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
79.8
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
79.3
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
72.8
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
62.2
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
61.8
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
53.1
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.