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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 32.4
Min RPKM: 2.3
Std RPKM: 5.1
Median RPKM: 12.6
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
32.4
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
24.1
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
22.6
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
22.6
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
21.3
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
20.3
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
19.9
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
19.6
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
19.3
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
19.1
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
18.3
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
18.2
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
17.9
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
17.6
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
16.7
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
16.6
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
16.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
16.3
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
16.1
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
16.1
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
16.0
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
15.9
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
15.6
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
15.4
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
15.4
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
15.3
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
15.1
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
14.9
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
14.7
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
14.7
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
14.4
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
14.1
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
14.1
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
14.1
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
13.9
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
13.7
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
13.6
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
13.6
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
13.5
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
13.5
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
13.2
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
13.1
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
13.1
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
12.9
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
12.9
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
12.9
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
12.6
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
12.6
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
12.6
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
12.5
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
12.4
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
12.3
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
12.1
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
11.8
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
11.7
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
11.5
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
11.1
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
10.9
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
10.7
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
10.7
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
10.6
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
10.3
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
9.7
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
9.6
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
9.5
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
9.2
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
9.1
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
8.9
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
8.9
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
8.9
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
8.8
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
8.7
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
8.2
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
8.0
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
8.0
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
8.0
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
7.9
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
7.8
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
7.7
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
7.3
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
7.2
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
7.2
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
7.1
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
6.8
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
5.7
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
5.7
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
5.3
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
5.0
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
4.4
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
4.2
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
3.9
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
3.3
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
2.8
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
2.3
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.