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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 300
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 16.8
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 122.1
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1838.3
Min RPKM: 18.2
Std RPKM: 347.2
Median RPKM: 339.2
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
1838.3
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
1820.2
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
1662.6
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
1490.6
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
1414.5
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
1330.6
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
1282.9
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
1276.4
GTEX-REY6-2426-SM-48FF5
60-69 years, male
1092.3
GTEX-11P82-1326-SM-5HL62
20-29 years, male
1060.2
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
1032.7
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
1030.0
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
1023.7
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
1019.6
GTEX-WFON-1826-SM-3GILG
40-49 years, male
1016.2
GTEX-144GM-0926-SM-5O994
20-29 years, male
991.0
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
989.7
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
948.1
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
937.2
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
934.9
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
922.5
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
911.8
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
892.4
GTEX-1192X-2326-SM-5987X
50-59 years, male
884.7
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
878.6
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
874.2
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
871.4
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
868.6
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
864.3
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
832.2
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
831.3
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
812.1
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
806.8
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
795.3
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
793.3
GTEX-117YX-1426-SM-5H12H
50-59 years, male
793.2
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
779.8
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
768.9
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
764.4
GTEX-R53T-1526-SM-48FEK
50-59 years, female
755.7
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
746.8
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
722.4
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
713.3
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
704.3
GTEX-R55D-0826-SM-48FEA
50-59 years, male
701.4
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
701.3
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
692.7
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
668.3
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
665.8
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
650.9
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
635.1
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
624.6
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
621.5
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
618.1
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
613.6
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
609.0
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
570.1
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
565.5
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
556.7
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
551.5
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
549.3
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
548.3
GTEX-X261-0626-SM-3NMD9
50-59 years, male
546.7
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
536.2
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
529.7
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
522.5
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
511.0
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
509.4
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
503.0
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
492.3
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
491.5
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
489.6
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
488.9
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
477.2
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
474.4
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
462.7
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
462.0
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
461.4
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
452.0
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
449.4
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
443.2
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
441.9
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
441.0
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
440.1
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
438.6
GTEX-QEL4-2126-SM-447AE
50-59 years, male
438.4
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
438.0
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
430.1
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
418.8
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
412.2
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
407.4
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
404.4
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
402.1
GTEX-14753-2426-SM-5LU8U
60-69 years, male
399.7
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
398.4
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
391.3
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
390.7
GTEX-TML8-1226-SM-32QON
40-49 years, female
381.9
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
368.4
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
361.2
GTEX-13113-1726-SM-5GCOO
60-69 years, female
357.7
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
357.4
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
353.9
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
352.9
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
352.0
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
351.8
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
341.7
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
336.6
GTEX-1122O-1226-SM-5H113
60-69 years, female
335.1
GTEX-QVJO-1826-SM-447C9
60-69 years, female
334.0
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
332.1
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
330.0
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
329.7
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
326.9
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
325.8
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
324.6
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
321.7
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
316.8
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
313.1
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
302.8
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
301.0
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
298.7
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
285.6
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
281.1
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
278.0
GTEX-11P81-1926-SM-5BC53
30-39 years, female
277.8
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
269.9
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
269.7
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
265.6
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
264.4
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
259.6
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
255.2
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
254.2
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
253.2
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
250.4
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
249.1
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
244.8
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
243.3
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
238.8
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
234.2
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
233.3
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
231.6
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
231.5
GTEX-117XS-1926-SM-5GICO
60-69 years, male
227.6
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
225.8
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
223.5
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
220.3
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
218.6
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
217.2
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
208.0
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
207.0
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
203.2
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
196.7
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
195.2
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
192.9
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
186.8
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
181.3
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
180.4
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
179.5
GTEX-XBED-1626-SM-47JYN
60-69 years, male
176.5
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
174.6
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
172.8
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
171.2
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
167.4
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
167.4
GTEX-S341-1526-SM-4AD6K
40-49 years, female
162.1
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
159.1
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
158.4
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
158.0
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
152.7
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
142.9
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
138.1
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
138.1
GTEX-111YS-1926-SM-5GICC
60-69 years, male
137.1
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
134.0
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
132.7
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
132.4
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
131.4
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
126.4
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
123.0
GTEX-11EI6-0626-SM-5985T
60-69 years, male
122.6
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
122.5
GTEX-11OF3-1926-SM-59889
60-69 years, male
122.0
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
119.1
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
117.8
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
114.8
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
113.8
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
112.7
GTEX-T6MN-0726-SM-32PML
50-59 years, male
109.8
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
106.2
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
103.3
GTEX-RU72-0626-SM-46MUI
50-59 years, female
98.7
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
94.8
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
85.3
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
85.1
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
84.0
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
82.4
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
78.0
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
73.1
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
70.3
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
70.1
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
68.9
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
60.2
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
59.8
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
57.8
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
51.8
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
51.1
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
48.6
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
47.1
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
45.1
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
43.8
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
29.1
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
21.0
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
18.2
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.