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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 1352.2
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 169.7
Min RPKM: 63.9
Std RPKM: 23.3
Median RPKM: 129.0
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
169.7
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
168.9
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
168.6
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
168.4
GTEX-X585-3026-SM-46MWF
50-59 years, male
167.0
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
166.6
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
162.9
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
161.4
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
158.0
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
156.7
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
155.2
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
154.6
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
150.5
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
149.1
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
148.9
GTEX-WL46-2926-SM-3LK82
50-59 years, male
148.9
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
147.9
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
147.6
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
147.2
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
145.7
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
145.6
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
145.4
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
144.8
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
144.2
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
144.1
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
144.0
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
143.0
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
142.2
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
142.0
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
141.3
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
141.0
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
140.6
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
140.5
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
139.8
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
139.7
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
139.7
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
139.0
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
138.9
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
137.4
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
137.1
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
136.8
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
136.3
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
135.8
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
135.6
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
134.9
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
134.2
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
134.0
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
133.3
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
133.1
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
133.1
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
132.9
GTEX-11PRG-2926-SM-5987A
50-59 years, male
132.7
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
132.5
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
131.1
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
131.0
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
130.9
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
129.1
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
128.9
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
128.6
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
128.5
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
128.3
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
128.2
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
128.1
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
128.1
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
128.0
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
127.6
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
127.1
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
127.1
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
124.0
GTEX-1128S-2726-SM-5H12C
60-69 years, female
123.3
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
123.1
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
122.8
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
121.1
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
121.1
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
120.6
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
120.5
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
119.3
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
118.8
GTEX-145MF-2726-SM-5O995
50-59 years, male
118.4
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
116.2
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
115.5
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
113.8
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
113.1
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
111.3
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
111.0
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
110.4
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
110.2
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
109.9
GTEX-144FL-3026-SM-5O99C
50-59 years, male
108.9
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
107.1
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
105.2
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
104.7
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
100.8
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
100.1
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
99.8
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
99.5
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
99.5
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
99.2
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
97.5
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
96.8
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
93.6
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
93.0
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
92.9
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
92.3
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
92.0
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
91.0
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
90.4
GTEX-11GSP-3226-SM-5986O
60-69 years, female
85.0
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
83.7
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
80.1
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
79.0
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
74.7
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
65.9
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
63.9
Show all
Brain - Frontal Cortex (BA9) RPKM: 155.5
Samples: 108
Max RPKM: 261.1
Min RPKM: 52.1
Std RPKM: 40.8
Median RPKM: 161.2
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
261.1
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
249.4
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
245.4
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
238.6
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
224.8
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
221.3
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
212.5
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
206.5
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
206.3
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
204.7
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
204.4
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
201.9
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
200.9
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
198.2
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
194.7
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
193.6
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
191.6
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
191.1
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
190.0
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
187.6
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
187.3
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
185.4
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
185.2
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
180.9
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
179.9
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
179.7
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
179.6
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
179.3
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
179.0
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
179.0
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
178.0
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
177.9
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
176.7
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
176.1
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
175.5
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
174.3
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
173.7
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
170.5
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
170.2
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
170.2
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
169.7
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
167.3
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
166.3
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
166.2
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
166.2
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
165.4
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
164.3
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
164.2
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
164.1
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
163.1
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
163.1
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
162.5
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
162.3
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
161.4
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
161.1
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
160.7
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
160.7
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
159.4
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
157.8
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
157.3
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
155.4
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
155.3
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
153.6
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
153.0
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
152.5
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
152.5
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
150.1
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
149.1
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
147.9
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
146.9
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
145.0
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
144.0
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
143.6
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
142.9
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
135.7
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
135.6
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
135.4
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
134.8
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
132.3
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
132.2
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
129.4
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
125.5
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
123.8
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
123.6
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
122.9
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
121.3
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
121.1
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
119.9
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
116.3
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
114.4
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
113.7
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
112.8
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
111.4
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
108.1
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
105.5
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
104.3
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
101.9
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
97.2
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
97.0
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
96.8
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
93.1
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
86.2
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
78.7
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
71.9
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
70.6
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
66.3
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
60.0
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
52.1
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.