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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 58.4
Min RPKM: 0.0
Std RPKM: 15.9
Median RPKM: 3.4
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
58.4
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
57.8
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
51.3
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
48.8
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
46.4
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
44.0
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
42.8
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
42.1
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
41.8
GTEX-S341-1226-SM-4AD5S
40-49 years, female
41.8
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
40.1
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
37.1
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
34.3
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
32.4
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
30.9
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
29.3
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
29.2
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
28.6
GTEX-11I78-2026-SM-5987C
50-59 years, female
26.9
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
26.9
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
23.4
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
21.4
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
19.5
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
19.3
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
18.4
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
18.3
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
17.7
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
17.3
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
17.2
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
16.9
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
16.2
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
14.7
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
14.7
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
13.7
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
12.6
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
11.9
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
9.7
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
8.2
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
7.7
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
7.2
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
6.6
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
6.6
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
6.2
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
5.7
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
5.6
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
4.2
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
4.1
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
3.5
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
3.3
GTEX-QCQG-1226-SM-48U23
50-59 years, female
3.2
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
2.7
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
2.5
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
2.4
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
2.1
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
2.0
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
1.8
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
1.4
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
1.1
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
1.0
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
0.9
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
0.8
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
0.5
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
0.4
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
0.3
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
0.3
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
0.3
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
0.2
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
0.1
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
0.1
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
0.1
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
0.1
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
0.1
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
0.1
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
0.1
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
0.1
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
0.1
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
0.1
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
0.0
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
0.0
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
0.0
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
0.0
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
0.0
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
0.0
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
0.0
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
0.0
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
0.0
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
0.0
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
0.0
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
0.0
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
0.0
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
0.0
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
0.0
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
0.0
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
0.0
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
0.0
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
0.0
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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