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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 1418.5
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 137.9
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 141.4
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1020.8
Min RPKM: 9.8
Std RPKM: 132.4
Median RPKM: 151.2
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
1020.8
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
803.1
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
533.4
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
528.2
GTEX-WFON-1826-SM-3GILG
40-49 years, male
519.0
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
461.5
GTEX-11OF3-1926-SM-59889
60-69 years, male
458.2
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
454.7
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
451.9
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
432.4
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
422.9
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
416.5
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
404.7
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
399.5
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
385.4
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
374.9
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
371.2
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
371.0
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
368.9
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
355.2
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
344.1
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
338.7
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
328.0
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
316.4
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
316.0
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
311.6
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
309.8
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
305.0
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
303.2
GTEX-1122O-1226-SM-5H113
60-69 years, female
297.4
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
295.3
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
292.6
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
289.1
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
289.0
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
284.8
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
281.8
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
279.3
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
272.1
GTEX-11EI6-0626-SM-5985T
60-69 years, male
268.0
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
264.8
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
262.9
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
262.7
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
262.5
GTEX-QVJO-1826-SM-447C9
60-69 years, female
262.1
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
260.8
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
257.8
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
254.9
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
252.6
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
240.0
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
239.4
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
238.0
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
235.3
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
235.3
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
234.1
GTEX-117YX-1426-SM-5H12H
50-59 years, male
232.3
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
230.5
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
228.9
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
228.5
GTEX-117XS-1926-SM-5GICO
60-69 years, male
219.7
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
215.3
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
213.8
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
213.8
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
213.6
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
210.2
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
208.6
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
208.2
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
207.7
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
207.3
GTEX-T6MN-0726-SM-32PML
50-59 years, male
207.1
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
206.6
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
204.5
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
203.8
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
201.6
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
198.6
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
198.5
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
198.4
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
198.3
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
194.3
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
191.9
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
184.3
GTEX-11P81-1926-SM-5BC53
30-39 years, female
184.0
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
180.5
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
178.4
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
178.2
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
177.6
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
177.5
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
175.9
GTEX-14753-2426-SM-5LU8U
60-69 years, male
173.0
GTEX-XBED-1626-SM-47JYN
60-69 years, male
172.9
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
172.9
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
172.2
GTEX-R55D-0826-SM-48FEA
50-59 years, male
171.4
GTEX-S341-1526-SM-4AD6K
40-49 years, female
171.1
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
167.4
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
167.1
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
166.7
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
165.1
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
165.1
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
162.3
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
160.9
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
155.9
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
153.9
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
153.7
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
152.8
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
152.6
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
152.2
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
151.9
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
150.5
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
149.7
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
148.5
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
148.4
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
143.1
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
141.8
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
141.8
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
135.0
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
134.6
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
133.6
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
133.3
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
133.3
GTEX-R53T-1526-SM-48FEK
50-59 years, female
132.8
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
128.0
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
127.4
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
126.6
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
125.7
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
124.1
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
124.1
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
122.8
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
119.7
GTEX-TML8-1226-SM-32QON
40-49 years, female
118.5
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
118.2
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
118.1
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
117.8
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
117.7
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
115.8
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
111.8
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
111.7
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
110.7
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
109.4
GTEX-1192X-2326-SM-5987X
50-59 years, male
105.7
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
102.7
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
101.5
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
101.5
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
100.9
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
99.8
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
99.5
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
98.3
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
97.2
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
93.8
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
93.1
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
92.9
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
89.5
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
89.2
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
89.0
GTEX-144GM-0926-SM-5O994
20-29 years, male
88.1
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
87.7
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
87.3
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
87.1
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
85.9
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
84.6
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
84.5
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
82.5
GTEX-X261-0626-SM-3NMD9
50-59 years, male
82.3
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
81.5
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
80.9
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
80.4
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
80.0
GTEX-13113-1726-SM-5GCOO
60-69 years, female
79.7
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
78.7
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
76.8
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
76.6
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
74.4
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
73.4
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
73.1
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
73.0
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
72.3
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
68.4
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
66.7
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
66.6
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
66.6
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
66.6
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
64.2
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
62.9
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
62.2
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
61.8
GTEX-QEL4-2126-SM-447AE
50-59 years, male
61.6
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
61.5
GTEX-RU72-0626-SM-46MUI
50-59 years, female
61.0
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
60.2
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
58.9
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
58.7
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
58.0
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
57.2
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
54.7
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
51.1
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
50.5
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
49.6
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
48.6
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
47.6
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
47.6
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
47.6
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
41.4
GTEX-111YS-1926-SM-5GICC
60-69 years, male
40.6
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
37.3
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
35.4
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
35.2
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
34.3
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
33.7
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
32.4
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
31.0
GTEX-11P82-1326-SM-5HL62
20-29 years, male
29.6
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
25.3
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
19.3
GTEX-REY6-2426-SM-48FF5
60-69 years, male
15.4
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
9.8
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.