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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 216.7
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 431.6
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 102.2
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1431.8
Min RPKM: 1.0
Std RPKM: 173.4
Median RPKM: 42.9
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
1431.8
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
1216.8
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
876.6
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
837.5
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
657.4
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
636.3
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
550.5
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
408.9
GTEX-XBED-1626-SM-47JYN
60-69 years, male
391.7
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
348.3
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
346.7
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
293.2
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
278.1
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
274.1
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
263.9
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
254.0
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
249.2
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
245.0
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
226.7
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
223.7
GTEX-X261-0626-SM-3NMD9
50-59 years, male
222.7
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
221.0
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
208.3
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
198.1
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
197.9
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
189.6
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
189.6
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
181.9
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
168.3
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
159.4
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
159.1
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
158.0
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
157.8
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
157.5
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
154.1
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
153.8
GTEX-1122O-1226-SM-5H113
60-69 years, female
147.3
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
142.6
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
136.4
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
133.2
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
132.8
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
130.1
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
128.5
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
122.9
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
122.9
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
121.7
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
120.1
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
114.9
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
114.5
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
112.4
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
112.4
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
107.6
GTEX-111YS-1926-SM-5GICC
60-69 years, male
106.8
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
106.1
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
104.2
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
104.2
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
100.9
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
100.4
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
100.2
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
95.3
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
92.6
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
92.1
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
89.6
GTEX-QEL4-2126-SM-447AE
50-59 years, male
89.0
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
86.3
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
85.1
GTEX-S341-1526-SM-4AD6K
40-49 years, female
85.1
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
83.7
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
83.4
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
79.9
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
79.7
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
78.6
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
75.8
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
75.1
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
73.1
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
73.0
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
69.7
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
69.6
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
67.4
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
66.5
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
64.1
GTEX-13113-1726-SM-5GCOO
60-69 years, female
63.6
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
63.2
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
63.0
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
61.6
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
60.6
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
59.1
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
59.0
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
58.8
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
57.1
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
56.5
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
55.7
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
53.7
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
53.2
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
50.7
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
50.2
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
50.1
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
47.5
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
47.5
GTEX-T6MN-0726-SM-32PML
50-59 years, male
47.2
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
46.7
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
46.1
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
44.8
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
44.7
GTEX-14753-2426-SM-5LU8U
60-69 years, male
44.5
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
43.4
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
43.1
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
42.8
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
41.8
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
41.1
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
40.8
GTEX-11EI6-0626-SM-5985T
60-69 years, male
40.6
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
40.3
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
40.0
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
39.7
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
39.5
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
38.9
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
38.2
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
37.8
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
37.7
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
37.0
GTEX-1192X-2326-SM-5987X
50-59 years, male
33.6
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
33.1
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
32.8
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
32.2
GTEX-RU72-0626-SM-46MUI
50-59 years, female
32.0
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
31.2
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
31.2
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
30.9
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
29.6
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
29.2
GTEX-R53T-1526-SM-48FEK
50-59 years, female
29.1
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
28.0
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
27.0
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
26.8
GTEX-11P81-1926-SM-5BC53
30-39 years, female
26.0
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
26.0
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
25.6
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
24.1
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
23.7
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
23.3
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
22.9
GTEX-WFON-1826-SM-3GILG
40-49 years, male
21.6
GTEX-TML8-1226-SM-32QON
40-49 years, female
21.0
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
20.2
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
19.1
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
17.7
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
17.7
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
17.6
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
17.6
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
17.2
GTEX-REY6-2426-SM-48FF5
60-69 years, male
16.9
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
16.6
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
16.3
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
16.2
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
16.0
GTEX-117YX-1426-SM-5H12H
50-59 years, male
15.4
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
15.4
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
15.2
GTEX-R55D-0826-SM-48FEA
50-59 years, male
14.9
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
14.5
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
14.3
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
13.5
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
13.3
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
13.3
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
13.1
GTEX-QVJO-1826-SM-447C9
60-69 years, female
13.0
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
12.9
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
11.8
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
11.7
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
11.5
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
11.1
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
11.0
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
10.5
GTEX-11OF3-1926-SM-59889
60-69 years, male
10.4
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
10.1
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
9.0
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
8.7
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
8.6
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
8.6
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
8.4
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
8.2
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
8.1
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
8.1
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
7.6
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
7.6
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
7.4
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
7.0
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
6.8
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
6.6
GTEX-144GM-0926-SM-5O994
20-29 years, male
6.5
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
6.4
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
6.0
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
4.5
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
4.4
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
4.1
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
4.1
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
4.0
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
3.8
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
3.6
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
3.5
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
3.3
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
3.0
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
2.9
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
2.7
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
2.6
GTEX-11P82-1326-SM-5HL62
20-29 years, male
2.5
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
2.4
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
2.3
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
2.0
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
1.9
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
1.7
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
1.4
GTEX-117XS-1926-SM-5GICO
60-69 years, male
1.0
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.