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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 28.9
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 26.4
Min RPKM: 0.9
Std RPKM: 5.5
Median RPKM: 17.1
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
26.4
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
26.0
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
25.7
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
24.7
GTEX-X585-3026-SM-46MWF
50-59 years, male
24.2
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
24.1
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
23.3
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
23.1
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
23.0
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
22.8
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
22.4
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
22.2
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
22.2
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
22.0
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
21.9
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
21.9
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
21.8
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
21.8
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
21.8
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
21.3
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
21.3
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
21.2
GTEX-WL46-2926-SM-3LK82
50-59 years, male
21.1
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
21.1
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
21.0
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
20.7
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
20.4
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
20.1
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
20.0
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
19.9
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
19.8
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
19.7
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
19.5
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
19.5
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
19.4
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
19.3
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
19.1
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
18.9
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
18.8
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
18.7
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
18.7
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
18.7
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
18.6
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
18.3
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
17.9
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
17.9
GTEX-145MF-2726-SM-5O995
50-59 years, male
17.8
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
17.8
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
17.7
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
17.7
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
17.7
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
17.6
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
17.6
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
17.4
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
17.2
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
17.1
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
17.1
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
17.1
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
17.1
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
17.0
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
16.8
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
16.7
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
16.6
GTEX-11PRG-2926-SM-5987A
50-59 years, male
16.3
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
16.0
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
16.0
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
15.8
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
15.7
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
15.5
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
15.4
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
15.3
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
15.1
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
15.1
GTEX-1128S-2726-SM-5H12C
60-69 years, female
14.9
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
14.9
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
14.9
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
14.8
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
14.7
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
14.4
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
14.0
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
13.8
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
13.7
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
13.6
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
13.5
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
13.4
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
13.2
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
13.1
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
12.6
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
12.3
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
12.2
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
11.4
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
11.3
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
11.0
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
10.8
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
10.5
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
10.3
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
10.0
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
9.7
GTEX-144FL-3026-SM-5O99C
50-59 years, male
9.7
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
8.9
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
8.5
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
7.5
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
7.3
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
6.9
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
6.7
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
6.3
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
6.2
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
6.2
GTEX-11GSP-3226-SM-5986O
60-69 years, female
5.7
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
4.9
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
4.5
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
3.4
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
2.4
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
0.9
Show all
Brain - Frontal Cortex (BA9) RPKM: 14.0
Samples: 108
Max RPKM: 24.1
Min RPKM: 2.3
Std RPKM: 5.6
Median RPKM: 15.0
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
24.1
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
23.6
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
23.6
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
22.3
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
22.2
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
22.1
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
21.9
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
21.7
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
21.1
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
20.9
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
20.9
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
20.6
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
20.5
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
20.5
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
20.4
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
20.4
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
20.3
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
20.2
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
20.1
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
19.7
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
19.7
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
19.6
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
19.5
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
19.5
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
18.8
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
18.7
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
18.5
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
18.4
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
18.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
18.1
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
18.1
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
18.0
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
17.8
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
17.6
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
17.2
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
17.0
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
16.9
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
16.8
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
16.6
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
16.6
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
16.6
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
16.6
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
16.6
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
16.5
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
16.5
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
16.3
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
16.3
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
16.2
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
16.1
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
15.8
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
15.6
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
15.5
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
15.3
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
15.1
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
15.0
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
14.6
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
14.6
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
14.5
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
14.4
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
14.0
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
13.5
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
13.5
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
13.4
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
13.3
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
13.2
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
13.2
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
13.2
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
13.0
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
12.9
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
12.0
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
11.7
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
11.5
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
11.0
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
11.0
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
10.9
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
10.8
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
10.8
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
10.8
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
10.4
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
10.1
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
10.0
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
9.9
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
9.6
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
9.4
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
9.2
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
9.2
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
8.8
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
8.2
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
8.1
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
8.0
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
7.9
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
7.8
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
7.8
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
6.3
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
5.7
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
5.4
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
4.7
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
4.7
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
4.5
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
4.5
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
4.4
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
3.8
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
3.6
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
3.4
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
3.4
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
3.2
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
2.3
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
2.3
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Male, age 5
