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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 275.3
Min RPKM: 0.3
Std RPKM: 65.9
Median RPKM: 113.6
GTEX-Y5V6-2226-SM-4VDTC
60-69 years, male
275.3
GTEX-12WSL-2126-SM-5GCNG
50-59 years, male
274.2
GTEX-13111-2326-SM-5LZUQ
50-59 years, male
272.8
GTEX-ZC5H-2726-SM-5KLZW
40-49 years, female
244.9
GTEX-146FR-1226-SM-5SIA7
60-69 years, female
237.5
GTEX-X261-2426-SM-4PQZU
50-59 years, male
218.8
GTEX-ZXG5-2826-SM-5NQ8T
60-69 years, male
209.0
GTEX-YB5K-1726-SM-5IFIZ
40-49 years, female
206.0
GTEX-1314G-2026-SM-5LZUM
30-39 years, male
205.1
GTEX-X5EB-1726-SM-4E3J7
40-49 years, male
202.2
GTEX-13G51-2426-SM-5LZY8
60-69 years, male
194.8
GTEX-YF7O-2226-SM-5CVN8
50-59 years, male
185.7
GTEX-X15G-2126-SM-4PQZR
50-59 years, female
174.6
GTEX-1445S-2926-SM-5O993
60-69 years, male
174.2
GTEX-13O21-1926-SM-5MR39
50-59 years, male
168.2
GTEX-111FC-2926-SM-5GZY7
60-69 years, male
162.6
GTEX-XV7Q-2426-SM-4BRV8
40-49 years, female
160.4
GTEX-1339X-2326-SM-5HL5B
40-49 years, male
156.6
GTEX-13QJC-2326-SM-5Q5CD
60-69 years, female
148.6
GTEX-ZPU1-2326-SM-57WEP
40-49 years, male
145.5
GTEX-XMK1-2626-SM-4B65R
40-49 years, male
144.8
GTEX-13113-1526-SM-5EGHV
60-69 years, female
144.3
GTEX-14B4R-1426-SM-5Q5CG
30-39 years, male
142.7
GTEX-WFJO-2026-SM-4LVM3
30-39 years, male
130.2
GTEX-145ME-1626-SM-5RQI3
40-49 years, female
129.6
GTEX-11P82-0926-SM-5986X
20-29 years, male
123.0
GTEX-13OVI-2326-SM-5KM47
60-69 years, female
119.5
GTEX-WYVS-2026-SM-4RGNS
40-49 years, female
117.0
GTEX-11TUW-2426-SM-5EQKB
60-69 years, male
113.6
GTEX-ZP4G-1926-SM-57WDZ
20-29 years, female
110.3
GTEX-11ZTT-2226-SM-5CVLP
60-69 years, female
108.7
GTEX-ZT9W-2126-SM-51MSF
50-59 years, male
106.2
GTEX-11P81-2026-SM-5P9GT
30-39 years, female
105.4
GTEX-1117F-3026-SM-5GZYU
60-69 years, female
104.9
GTEX-Y111-2626-SM-4TT24
50-59 years, male
100.3
GTEX-WOFM-2126-SM-4OOSR
20-29 years, male
91.9
GTEX-Y3I4-1926-SM-4TT8L
50-59 years, male
91.2
GTEX-12WSM-1826-SM-5BC64
60-69 years, male
90.5
GTEX-11WQK-2926-SM-5EQKT
50-59 years, male
85.2
GTEX-11NV4-1926-SM-5N9D4
60-69 years, male
84.4
GTEX-ZQG8-2126-SM-4YCF1
60-69 years, female
80.4
GTEX-ZA64-1726-SM-5CVMF
20-29 years, male
80.2
GTEX-Y5LM-1826-SM-4VDT9
40-49 years, female
79.7
GTEX-131XF-2826-SM-5EGKH
60-69 years, male
68.9
GTEX-12WSN-2226-SM-5DUXT
40-49 years, male
67.3
GTEX-ZQUD-2126-SM-51MSY
30-39 years, male
67.0
GTEX-XGQ4-2626-SM-4AT6B
50-59 years, male
66.3
GTEX-X3Y1-1926-SM-4PQZO
40-49 years, male
64.4
GTEX-11EQ9-2026-SM-5P9JI
30-39 years, male
60.0
GTEX-ZE7O-2926-SM-51MSG
50-59 years, female
57.6
GTEX-13NYB-2426-SM-5IFF4
40-49 years, male
56.9
GTEX-13JVG-2926-SM-5J2N9
60-69 years, male
42.8
GTEX-11ZTS-3026-SM-5EQM7
60-69 years, female
41.4
GTEX-13VXT-1726-SM-5IFF5
20-29 years, female
41.3
GTEX-13CF2-2426-SM-5LZYL
60-69 years, male
35.6
GTEX-13OVL-2926-SM-5IFG3
50-59 years, male
32.0
GTEX-13NYC-2626-SM-5K7VN
60-69 years, male
0.3
Show all
SALIVARY GLAND - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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