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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 95.6
Min RPKM: 16.8
Std RPKM: 17.7
Median RPKM: 41.1
GTEX-111YS-1426-SM-5GID8
60-69 years, male
95.6
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
86.1
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
74.3
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
73.1
GTEX-1122O-1326-SM-5H11F
60-69 years, female
70.0
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
69.2
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
68.1
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
67.7
GTEX-ZTSS-0926-SM-59865
40-49 years, male
66.6
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
64.4
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
64.4
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
64.4
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
64.1
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
63.8
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
62.7
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
61.5
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
61.1
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
60.9
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
59.9
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
59.3
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
59.2
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
56.8
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
55.9
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
55.5
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
54.7
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
54.3
GTEX-13113-1226-SM-5EGHT
60-69 years, female
53.9
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
52.3
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
52.3
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
52.0
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
51.2
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
50.1
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
49.6
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
49.5
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
49.5
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
47.2
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
46.9
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
45.3
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
44.1
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
43.8
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
43.4
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
42.4
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
41.8
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
41.4
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
40.7
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
39.3
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
38.9
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
37.7
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
36.8
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
34.8
GTEX-13O61-1326-SM-5KM31
60-69 years, male
34.6
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
34.4
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
33.7
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
33.7
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
33.1
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
32.9
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
31.1
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
30.9
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
30.6
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
30.5
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
30.5
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
29.7
GTEX-1192X-2526-SM-59868
50-59 years, male
29.2
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
29.0
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
28.9
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
28.7
GTEX-117YX-0326-SM-5GICL
50-59 years, male
28.0
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
27.2
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
26.9
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
26.1
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
25.8
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
25.2
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
24.9
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
24.7
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
23.0
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
23.0
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
22.5
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
21.5
GTEX-13111-1426-SM-5DUW3
50-59 years, male
21.1
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
21.1
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
21.1
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
20.7
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
20.2
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
19.6
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
18.1
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
17.8
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
17.6
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
16.8
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.