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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 117
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 220.5
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 82.9
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 433.7
Min RPKM: 12.9
Std RPKM: 65.2
Median RPKM: 91.5
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
433.7
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
306.1
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
304.5
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
292.5
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
266.4
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
265.6
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
255.0
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
252.0
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
239.2
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
230.6
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
221.1
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
220.5
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
219.2
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
211.0
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
210.5
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
209.2
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
209.2
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
208.3
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
208.2
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
202.8
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
197.5
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
189.5
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
187.1
GTEX-T6MN-0726-SM-32PML
50-59 years, male
186.8
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
185.0
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
179.5
GTEX-XBED-1626-SM-47JYN
60-69 years, male
178.7
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
176.5
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
174.6
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
174.4
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
172.8
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
172.6
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
172.2
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
171.4
GTEX-RU72-0626-SM-46MUI
50-59 years, female
163.0
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
161.3
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
159.0
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
157.6
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
155.1
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
154.7
GTEX-11EI6-0626-SM-5985T
60-69 years, male
154.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
154.3
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
153.9
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
153.6
GTEX-111YS-1926-SM-5GICC
60-69 years, male
150.8
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
150.6
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
148.6
GTEX-TML8-1226-SM-32QON
40-49 years, female
147.5
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
146.8
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
142.0
GTEX-S341-1526-SM-4AD6K
40-49 years, female
140.6
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
138.4
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
137.8
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
137.4
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
135.6
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
134.7
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
134.2
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
134.0
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
133.4
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
132.7
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
132.3
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
130.9
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
130.8
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
130.5
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
124.2
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
123.7
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
122.8
GTEX-11P81-1926-SM-5BC53
30-39 years, female
122.2
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
122.0
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
121.3
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
119.7
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
117.6
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
117.6
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
116.1
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
114.8
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
114.6
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
114.1
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
114.0
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
111.0
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
110.7
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
109.0
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
108.7
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
108.5
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
107.0
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
107.0
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
105.3
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
105.1
GTEX-117YX-1426-SM-5H12H
50-59 years, male
104.2
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
103.8
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
103.6
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
103.2
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
102.5
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
101.5
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
101.1
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
100.9
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
98.7
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
98.6
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
98.2
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
97.6
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
97.4
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
97.1
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
96.8
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
96.0
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
94.7
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
92.9
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
92.7
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
92.7
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
90.4
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
90.0
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
89.8
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
89.8
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
89.6
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
89.4
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
86.8
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
86.4
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
85.7
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
85.0
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
84.0
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
83.5
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
83.2
GTEX-QEL4-2126-SM-447AE
50-59 years, male
83.2
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
81.8
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
81.4
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
80.2
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
79.9
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
79.6
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
79.1
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
78.7
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
78.6
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
77.4
GTEX-1192X-2326-SM-5987X
50-59 years, male
76.2
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
75.4
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
73.6
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
69.0
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
68.3
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
67.9
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
67.8
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
67.3
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
66.7
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
66.1
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
65.8
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
65.2
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
64.9
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
64.4
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
64.0
GTEX-13113-1726-SM-5GCOO
60-69 years, female
62.7
GTEX-1122O-1226-SM-5H113
60-69 years, female
62.3
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
62.1
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
61.5
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
61.1
GTEX-117XS-1926-SM-5GICO
60-69 years, male
60.4
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
59.6
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
59.0
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
57.8
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
57.3
GTEX-QVJO-1826-SM-447C9
60-69 years, female
56.5
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
56.4
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
56.3
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
54.6
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
54.4
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
53.9
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
53.8
GTEX-X261-0626-SM-3NMD9
50-59 years, male
53.6
GTEX-11OF3-1926-SM-59889
60-69 years, male
52.0
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
51.8
GTEX-R53T-1526-SM-48FEK
50-59 years, female
51.7
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
51.1
GTEX-R55D-0826-SM-48FEA
50-59 years, male
49.9
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
49.2
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
49.1
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
48.5
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
48.5
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
47.8
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
47.0
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
46.6
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
46.2
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
46.0
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
45.3
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
44.7
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
44.5
GTEX-WFON-1826-SM-3GILG
40-49 years, male
44.1
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
43.4
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
41.8
GTEX-144GM-0926-SM-5O994
20-29 years, male
41.8
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
41.2
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
41.0
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
40.8
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
40.3
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
40.1
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
39.5
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
38.8
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
38.4
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
38.1
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
36.7
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
34.6
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
34.0
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
32.6
GTEX-14753-2426-SM-5LU8U
60-69 years, male
32.3
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
31.5
GTEX-REY6-2426-SM-48FF5
60-69 years, male
31.5
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
31.2
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
31.1
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
28.8
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
27.7
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
26.5
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
25.5
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
24.4
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
24.1
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
21.8
GTEX-11P82-1326-SM-5HL62
20-29 years, male
21.5
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
19.5
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
14.1
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
13.7
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
12.9
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.