We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 907.3
Min RPKM: 30.7
Std RPKM: 156.9
Median RPKM: 264.7
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
907.3
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
743.6
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
627.8
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
584.8
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
574.0
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
563.8
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
552.0
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
538.6
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
510.5
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
506.8
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
493.6
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
454.0
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
451.0
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
434.0
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
423.6
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
419.8
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
418.2
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
414.8
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
403.8
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
385.7
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
381.4
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
379.8
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
378.0
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
372.8
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
370.7
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
365.1
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
364.3
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
362.3
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
354.8
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
332.1
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
329.8
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
327.3
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
322.0
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
316.6
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
313.3
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
311.1
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
301.3
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
293.0
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
289.8
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
287.4
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
285.8
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
282.0
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
277.2
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
269.2
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
268.1
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
268.1
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
266.6
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
266.5
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
263.0
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
260.8
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
256.7
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
256.3
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
255.4
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
251.2
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
247.2
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
237.8
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
236.5
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
235.4
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
232.8
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
229.6
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
228.2
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
227.8
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
224.1
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
216.0
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
197.4
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
193.3
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
190.4
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
187.6
GTEX-11I78-2026-SM-5987C
50-59 years, female
182.5
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
167.8
GTEX-S341-1226-SM-4AD5S
40-49 years, female
163.7
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
158.6
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
157.4
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
152.6
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
151.6
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
146.1
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
145.7
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
145.6
GTEX-QCQG-1226-SM-48U23
50-59 years, female
137.5
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
136.7
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
130.7
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
127.2
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
126.7
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
121.2
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
116.6
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
114.1
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
110.6
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
97.2
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
94.9
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
91.3
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
81.9
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
79.9
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
79.5
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
72.7
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
45.2
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
30.7
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.